Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
NarrativeWikipediaarticle
Traits & measurements1 literature sources4 traits
Occurrence & distributionGBIF · OBIS · PBDB260 records
DNA & barcodingBOLD8 specimens
Deep timePBDB2 fossils
01Narrative
Agassizia scrobiculata is a species of sea urchin of the family Prenasteridae.Kroh, A. (2010). Agassizia scrobiculata (Valenciennes, 1846). In: Kroh, A. & Mooi, R. (2010) World Echinoidea Database. at the World Register of Marine Species.
No narrative description available for this taxon yet.
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Agassizia scrobiculata has left across the world's sequence archives.
At a glance
DNA specimens8
BINs1
Marker genes2
Countries2
The DNA barcodethe species' typical barcode, built from every sequenced specimen
COI-5P658 bp consensus6 specimens
ACGT
▸ drag or hover over the strip to read any position — letter and how much it varies
Violet ticks below the strip = positions where individuals differ; flat = the species' unchanging signature. 100% of positions are identical in every specimen.
Diversity (π)0.09%
Haplotypes2
BIN1
Most divergent pair0.15%
Where individuals differ — all 1 variable positions, in barcode order
The species whose COI barcode is most similar to this one — a quick “who is this most like”. The percentage is how much the barcode differs; it approximates, but is not, the full evolutionary tree.
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★COI-5P16S
animal barcoderibosomal
07Deep time5.33–0.77 Ma
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
Fossil range5.33–0.77 Ma Pliocene, Pleistocene
Dated fossil finds2
StatusExtinct no longer alive anywhere
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Agassizia scrobiculata. Above itBeside it, each dot is one dated fossil find — few enough to count, so they are drawn individually rather than as a graph.
fossil range (PBDB) †each dot = one dated find
How it livedPBDB
Environmentmarine
Life habitshallow infaunal
Dietdeposit feeder, detritivore
Motilityslow-moving
Visionlimited
Compositionhigh Mg calcite
Reproductiondispersal=water,planktonic
Ontogenyaccretion,addition of parts
08Occurrence & distribution
Record type260 records
Wild obs. + sensor51
Museum / vouchered202
Fossil7
Range
Area of Occupancy AOO532 km²
Depth
0–200 m sunlit14
200–1000 m twilight0
1–4 km midnight0
>4 km abyssal0
median 13.9 m · max 20 m · 14 records with depth
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy97% within 1 km
≤100 m 20≤1 km 10≤10 km 1
31 georeferenced · 20 without coordinates
Open the mapobservation + sensor51
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy43% within 1 km
≤100 m 39≤1 km 27≤10 km 54>10 km 34
154 georeferenced · 48 without coordinates
Open the institutions mapphysical evidence202
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions8 of 13 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
CASlocation not on record
53
Washington, US
22
Instituto de Ciencias del Mar y Limnología, Unidad Académica Mazatlán, Universidad Nacional Autónoma de Méxicolocation not on record
20
Cambridge, US
16
Santa Barbara Museum of Natural Historylocation not on record
10
Los Angeles, US
4
New Haven, US
2
Stockholm, SE
2
Puerto Ayora, EC
2
Laboratorio de Ecosistemas Marinos y Acuicultura, Centro Universitario de Ciencias Biológicas y Agropecuarias, Universidad de Guadalajaralocation not on record
1
University of California Museum of Paleontologylocation not on record
1
Chicago, US
1
South Kensington, GB
1
13 institutions · 135 of 202 vouchered records shown · 4 without an institution code