⚠ sources differ — PanTHERIA: 49.89 days · AnAge: 91 days · AmnioteDB: 91 days
Diet & foraging4
Breadth5
Fruit10 %
Plant other90 %
Trophic levelherbivore
Habitat & environment2
Habitat breadth1
Terrestriality1.00
Physiology & chemistry4
Body temperature313 K
Metabolic rate20.62 W
Precipitation mean52.18 mm
Temperature mean199 decidegC
Other traits5
Activity cycle3.00
Foraging stratumG
Home range0.43 km²
Interbirth interval219 days
Population density1.27 /km²
05DNA & barcoding14 specimens
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Raphicerus campestris has left across the world's sequence archives.
At a glance
DNA specimens14
BINs1
Marker genes11
Countries1
The DNA barcodethe species' typical barcode, built from every sequenced specimen
COI-5P658 bp consensus4 specimens
ACGT
▸ drag or hover over the strip to read any position — letter and how much it varies
Violet ticks below the strip = positions where individuals differ; flat = the species' unchanging signature. 99% of positions are identical in every specimen.
Diversity (π)0.58%
Haplotypes2
BIN1
Most divergent pair0.76%
Where individuals differ — all 7 variable positions, in barcode order
The species whose COI barcode is most similar to this one — a quick “who is this most like”. The percentage is how much the barcode differs; it approximates, but is not, the full evolutionary tree.
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★COI-5PCOIICOXIIICYTBND1ND2ND3ND4ND4LND5-0ND6
animal barcodemitochondrial
Organelle genome
Besides the big genome in the nucleus, cells carry a small, circular loop of DNA inside the cell's energy factories — the mitochondria. It is inherited almost only from the mother and is a leftover from ancient bacteria that moved into the cell. The mitochondrial markers above (ND*, COX, CYTB…) are read from exactly this loop. Outer ring = one strand, inner ring = the other.
▸ Tap any coloured segment — or a gene chip — to see what it is
◖ violet arc = the COI-5P barcode — the ~650 bp read used to ID this species
Pick a coloured segment on the ring — or a gene chip — to read what that gene does.
protein-codingrRNAtRNA
06Genome at a glanceGoaT · NCBI
The complete instruction manualRaphicerus campestris carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Genome size≈3 137 860 433 bp assembly estimate
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
BACTERIUM Carsonella ruddii0.00016 Gb
FUNGUS0.04 Gb
INSECT0.25 Gb
THIS GENOME Raphicerus campestris3.14 Gb
HUMAN3.2 Gb
WHEAT17 Gb
FERN Tmesipteris160.45 Gb
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
Assembly levelScaffold
Completeness66.5% BUSCO
07Deep time2.58–0 Ma
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
Fossil range2.58–0 Ma Pleistocene, Holocene
Dated fossil finds48
Most finds around0.05 Ma 31 finds · Pleistocene
DNA clock origin2.41 Ma TimeTree
StatusExtinct no longer alive anywhere
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Raphicerus campestris. Above itBeside it, the bars count how many dated finds fall in each slice of time; the tallest bar is labelled, and heights use a square-root scale so that thin slices stay visible next to rich ones. Read this as how well each stretch of time is preserved and studied — thick bars mean plenty of the right kind of rock and plenty of collectors, which is related to, but not the same as, how common it actually was. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
fossil range (PBDB) †dated finds per sliceDNA clock origin
The two clocks disagree here. The fossil record reaches back to 2.58 Ma, but the molecular clock dates the lineage to only 2.41 Ma — about 0.17 Myr younger. A fossil cannot be older than the lineage it belongs to, so one of the two is off: either the fossil is assigned to the wrong species, or the clock is running fast.
Extinct — but the bar still reaches today. PBDB flags this lineage as extinct, yet its fossil range ends at 0 Ma — the present day. Both cannot be literally true. This is what it looks like when the youngest fossils fall inside the most recent slice of the time scale: the endpoint rounds to “today” rather than to the actual disappearance, which may be far too recent for an axis measured in millions of years to resolve. Read the young end of the bar (and the †) as the limit of the dated record, not as the date it died out.
How it livedPBDB
Environmentterrestrial
Life habitground dwelling
Dietgrazer, browser
Motilityactively mobile
Compositionhydroxyapatite
Reproductionviviparous
08Occurrence & distribution
Record type3 998 records
Wild obs. + sensor3 562
Museum / vouchered199
Fossil48
Other189
Origin
Native19
Range
Area of Occupancy AOO10 800 km²
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy77% within 1 km
≤100 m 1 304≤1 km 726≤10 km 278>10 km 323
2 631 georeferenced · 931 without coordinates
Open the mapobservation + sensor3 562
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy25% within 1 km
≤100 m 10≤1 km 10≤10 km 17>10 km 42
79 georeferenced · 120 without coordinates
Open the institutions mapphysical evidence199
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions17 of 22 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Cambridge, US
29
Washington, US
25
Bonn, DE
13
Denver, US
12
Los Angeles, US
11
Chicago, US
8
New Haven, US
6
Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record
6
CASlocation not on record
6
6
Geneva, CH
5
University of Wisconsin, Zoological Museumlocation not on record
4
Wuzhou, CN
4
Zacatecas, MX
3
Stockholm, SE
3
Saint John, CA
2
East Lansing, US
2
Berkeley, US
2
ASNHClocation not on record
1
Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record
1
Seattle, US
1
Toronto, CA
1
22 institutions · 151 of 199 vouchered records shown · 2 without an institution code