Aythya affinis
(Eyton, 1838) · speciesAt a glance
Sources12 archives
Databases and archives Aythya affinis's data was compiled from.
WikipediaWikimedia Foundation15 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility2 439 011 records↗
OBISOcean Biodiversity Information System241 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI1 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics14 specimens↗
Open Tree of LifeOpenTreephylogeny backbone↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
NCBIUS National Library of Medicinegenome & karyotype↗
Paleobiology DatabasePBDB consortiumfossil record↗
WikidataWikimedia Foundationstructured facts↗
IOC World Bird ListIOCbird checklist↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
The lesser scaup (Aythya affinis) is a small North American diving duck that migrates south as far as Central America in winter. It is colloquially known as the little bluebill or broadbill because of its distinctive blue bill. The origin of the name scaup may stem from the bird's preference for feeding on scalp—the Scottish word for clams, oysters, and mussels; however, some credit it to the female's discordant scaup call as the name's source. It is apparently a very close relative of the Holarctic greater scaup or "bluebill" (A. marila), with which it forms a superspecies. The scientific name is derived from Ancient Greek aithuia an unidentified seabird mentioned by authors including Hesychius and Aristotle, and Latin, affinis "related to", from its resemblance to the greater scaup.
No narrative description available for this taxon yet.
Size & morphology14
Life cycle & reproduction12
Diet & foraging6
Habitat & environment4
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Aythya affinis has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Aythya affinis carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 802×GoaT · Bird Chromosome Database
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Aythya affinis. Above itBeside it, the bars count how many dated finds fall in each slice of time; the tallest bar is labelled, and heights use a square-root scale so that thin slices stay visible next to rich ones. Read this as how well each stretch of time is preserved and studied — thick bars mean plenty of the right kind of rock and plenty of collectors, which is related to, but not the same as, how common it actually was. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
The two clocks disagree here. The fossil record reaches back to 5.33 Ma, but the molecular clock dates the lineage to only 0.86 Ma — about 4.47 Myr younger. A fossil cannot be older than the lineage it belongs to, so one of the two is off: either the fossil is assigned to the wrong species, or the clock is running fast.
How it livedPBDB
Record type2 439 271 records
Origin
Range
Depth
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions39 of 70 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| München, DE | 214 |
| Chicago, US | 203 |
| Toronto, CA | 192 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 191 |
| Cambridge, US | 175 |
| Ann Arbor, US | 169 |
| Berkeley, US | 110 |
| Ohio State University - Bird Division, Columbus, OH (OSUM)location not on record | 99 |
| New Haven, US | 73 |
| Mongolian Museum of Natural Historylocation not on record | 73 |
| Edmonton, CA | 72 |
| US | 69 |
| Seattle, US | 69 |
| Washington, US | 62 |
| Los Angeles, US | 57 |
| San Diego, US | 54 |
| Philadelphia, US | 53 |
| University of Nebraska State Museumlocation not on record | 49 |
| CASlocation not on record | 48 |
| Wuzhou, CN | 41 |
| Denver, US | 40 |
| Vancouver, CA | 34 |
| Iowa City, US | 34 |
| Tacoma, US | 31 |
| Royal Saskatchewan Museumlocation not on record | 29 |
| Sam Noble Oklahoma Museum of Natural Historylocation not on record | 28 |
| Washington State University, Charles R. Conner Museumlocation not on record | 28 |
| Delaware Museum of Nature and Sciencelocation not on record | 26 |
| Ithaca, US | 24 |
| Chicago, US | 22 |
| Texas Cooperative Wildlife Collectionlocation not on record | 22 |
| Central Michigan University Museum of Cultural and Natural Historylocation not on record | 21 |
| Copenhagen, DK | 16 |
| Saint John, CA | 16 |
| Albany, US | 12 |
| Science Museum of Minnesotalocation not on record | 11 |
| Zacatecas, MX | 10 |
| Indiana State Universitylocation not on record | 8 |
| ASNHClocation not on record | 8 |
| Ciudad de México, MX | 8 |
| Tall Timbers Research Stationlocation not on record | 6 |
| Geneva, CH | 6 |
| Mexico City, MX | 6 |
| University of Wyoming Museum of Vertebrateslocation not on record | 5 |
| University of Victorialocation not on record | 4 |
| Louisiana State University, Museum of Zoologylocation not on record | 4 |
| Helsinki, FI | 3 |
| South Kensington, GB | 3 |
| Instituto de Ecología Aplicada, Universidad Autónoma de Tamaulipaslocation not on record | 3 |
| Philip L. Wright Zoological Museumlocation not on record | 3 |
| Universidad Nacional de Colombia (UNAL)location not on record | 3 |
| Tuxtla Gutiérrez, MX | 3 |
| Brussels, BE | 3 |
| Morelia, MX | 2 |
| Arizona State University Biocollectionslocation not on record | 2 |
| 2 | |
| Universidad Católica de Manizaleslocation not on record | 2 |
| Moore Laboratory of Zoology, Occidental Collegelocation not on record | 2 |
| University of Alberta Museumslocation not on record | 2 |
| Zoologisches Museum Hamburglocation not on record | 2 |
| Santa Cruz, US | 1 |
| Tapachula, MX | 1 |
| Museo de Historia Natural “Gustavo Orcés V"location not on record | 1 |
| University of California Los Angeleslocation not on record | 1 |
| Natural History Museum of Utahlocation not on record | 1 |
| Mexico City, MX | 1 |
| Ensenada, MX | 1 |
| RBINS-Scientific Heritagelocation not on record | 1 |
| EL PASO, US | 1 |
| Ohio Wesleyan University Museum of Natural Historylocation not on record | 1 |
Where the DNA of Aythya affinis was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.