Apogonichthyoides umbratilis

Fraser & Allen, 2010 · species

image placeholder — illustration coming later

Animalia/Chordata/Perciformes/Apogonidae/Apogonichthyoides

At a glance

Occurrence records134

Data sources7

Biological traits7

DNA specimens8

eDNA detections5

Sources7 archives

Databases and archives Apogonichthyoides umbratilis's data was compiled from.

BioWikiNetmultilingual Wikipediamultilingual↗

GBIFGlobal Biodiversity Information Facility89 records↗

OBISOcean Biodiversity Information System45 records↗

ENAEuropean Nucleotide Archive · EMBL-EBI5 eDNA detections↗

BOLD SystemsCentre for Biodiversity Genomics8 specimens↗

Open Tree of LifeOpenTreephylogeny backbone↗

Catalogue of LifeCOLtaxonomy↗

On this page5 sections

Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.

NarrativeWikipediaarticle

Traits & measurements1 literature sources7 traits

Occurrence & distributionGBIF · OBIS134 records

Environmental DNA2 datasets · 2 countries5 detections

DNA & barcodingBOLD8 specimens

01Narrative

Apogonichthyoides umbratilis is een straalvinnige vissensoort uit de familie van de kardinaalbaarzen (Apogonidae). De wetenschappelijke naam van de soort is voor het eerst geldig gepubliceerd in 2010 door Fraser & Allen.

No narrative description available for this taxon yet.

02Traits & measurements

SourcesFishBase

Size & morphology1

Body length4.1 cm

Habitat & environment2

Habitat saltwateryes

Habitat zonepelagic-neritic

Uses & economy1

Commercial importanceof no interest

Other traits3

Depth max60 m

Depth min20 m

Vulnerability10

05DNA & barcoding8 specimens

A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Apogonichthyoides umbratilis has left across the world's sequence archives.

At a glance

DNA specimens8

BINs3

Marker genes1

eDNA detections5

Countries3

The DNA barcodethe species' typical barcode, built from every sequenced specimen

COI-5P674 bp consensus8 specimens

ACGT

▸ drag or hover over the strip to read any position — letter and how much it varies

Violet ticks below the strip = positions where individuals differ; flat = the species' unchanging signature. 84% of positions are identical in every specimen.

Where individuals differ — all 108 variable positions, in barcode order

2Tmostly conserved

35Cvariable

38Tmostly conserved

47Avariable

50Avariable

54Cvariable

62Avariable

68Tmostly conserved

77Avariable

86Avariable

89Gvariable

95Cvariable

98Cvariable

107Cmostly conserved

113Gmostly conserved

146Tmostly conserved

152Avariable

170Amostly conserved

173Avariable

201Cmostly conserved

206Cvariable

209Cvariable

218Tmostly conserved

224Avariable

227Avariable

230Cvariable

236Avariable

242Cvariable

251Cvariable

263Cvariable

266Avariable

269Tmostly conserved

272Cvariable

278Cmostly conserved

281Cvariable

284Cmostly conserved

287Cvariable

290Avariable

305Cvariable

308Cvariable

326Cvariable

329Cmostly conserved

332Avariable

338Cvariable

344Cvariable

350Avariable

359Amostly conserved

365Cvariable

389Cvariable

390Cvariable

392Avariable

398Cvariable

407Avariable

410Cvariable

413Cvariable

422Gmostly conserved

425Avariable

428Avariable

431Cvariable

434Gmostly conserved

437Gmostly conserved

440Avariable

443Cvariable

446Cvariable

452Cvariable

455Cmostly conserved

458Avariable

461Tvariable

467Cvariable

470Avariable

482Cvariable

484Cvariable

485Cvariable

491Avariable

494Cvariable

500Cvariable

506Avariable

509Cvariable

512Avariable

515Avariable

518Avariable

521Tmostly conserved

524Cvariable

530Cvariable

533Cvariable

536Cvariable

539Cvariable

540Cvariable

554Avariable

560Gvariable

563Avariable

566Cvariable

578Amostly conserved

581Avariable

584Avariable

600Cvariable

602Amostly conserved

611Avariable

623Gvariable

629Tvariable

632Avariable

638Cvariable

641Amostly conserved

653Avariable

656Cvariable

671Cmostly conserved

673Cvariable

674Avariable

TTGGCACCCTTTATCTAGTATTTGGTGCTTGAGCCGGTATAGTAGGAACAGCCCTAAGCCTACTCATTCGAGCCGAACTTAGCCAACCGG …

Variant network

Each circle is a barcode variant; bigger = more specimens, colour = region. Lines join the most similar variants and the tick marks count the mutations between them — a tight cluster is one “dialect”, a long line a more divergent lineage. Click a circle to list its actual specimens.

Diversity (π)8.6%

Haplotypes3

BINs3

Most divergent pair14.7%

Other

Closest relatives by DNA barcode

The species whose COI barcode is most similar to this one — a quick “who is this most like”. The percentage is how much the barcode differs; it approximates, but is not, the full evolutionary tree.

Fowleria auritasame family14.3%Nectamia viriasame family14.4%Scorpaena disparsame order14.6%Apogon talbotisame family14.7%Macrognathus maculatussame order15.2%

Marker genes sequenced

★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.

★COI-5P

animal barcode

08Occurrence & distribution

Record type134 records

Wild obs. + sensor2

Museum / vouchered132

Range

Area of Occupancy AOO196 km²

Depth

0–200 m sunlit17

200–1000 m twilight0

1–4 km midnight0

>4 km abyssal0

median 55 m · max 80.5 m · 17 records with depth

Wildobservation + sensor

Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.

Coordinate accuracy100% within 1 km

≤100 m 2

2 georeferenced

Open the mapobservation + sensor2

Museum / Voucheredphysical evidence

Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.

Coordinate accuracy74% within 1 km

≤100 m 7≤1 km 19≤10 km 3>10 km 6

35 georeferenced · 97 without coordinates

Open the institutions mapphysical evidence132

Wildobservation + sensor

Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.

10Collections & institutions

Holding institutions2 of 11 geolocated

Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.

Institution	Specimens
Kagoshima University Museumlocation not on record	45
Australian National Fish Collectionlocation not on record	16
Chicago, US	9
Western Australian Museumlocation not on record	8
SEAOBISlocation not on record	2
Museums Victorialocation not on record	2
ARMS-MBONlocation not on record	1
CASlocation not on record	1
Museum and Art Gallery of the Northern Territorylocation not on record	1
Toronto, CA	1
CSIRO, Australian National Fish Collectionlocation not on record	1

11 institutions · 87 of 132 vouchered records shown

09Environmental DNA5 detections

Where the DNA of Apogonichthyoides umbratilis was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.

Signal

Detections DNA found5

Studies independent surveys2

Countries2

Verifiable raw sequence linked1

Signal confidence: moderateweighed across independent studies, places & mapped detections

Where its DNA was found

0 of 5 detections have coordinates

Open the map2 countries0

Marine Protected Area; protected; 9.2 - Subt…

How strong is each trace?

DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.

Modelled climatemodelled

−15°Ctemperature across detection sites+40°C

Temperature median22.9 °C 13.9–24.1

Seasonal swing summer↔winter6.30 °C

Max temp (day)23.6 °C 15.4–24.9

Min temp (night)22.1 °C 10.5–23.3

Precipitation12.8 mm/mo 2.70–77.4

Air humidity60.7 % 60.4–65.3

Vapour deficit934 Pa 620–1,160

Cloud cover19.7 % 14.7–54.6

CHELSA 1981–2010, ~9 km grid, at location & month of 3 detection points · median with p10–p90 · reflects where sampling happened, not only the true niche

How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.

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