Anchoa lyolepis, the shortfinger anchovy, is a species of anchovy native to the western Atlantic Ocean from New York to Brazil. This species can reach a length of 12 cm TL, though they usually do not exceed 9 cm TL. This species is important to local subsistence fisheries and is commonly used as bait.
No narrative description available for this taxon yet.
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Anchoa lyolepis has left across the world's sequence archives.
At a glance
DNA specimens11
BINs2
Marker genes1
eDNA detections78
Countries2
The DNA barcodethe species' typical barcode, built from every sequenced specimen
COI-5P652 bp consensus10 specimens
ACGT
▸ drag or hover over the strip to read any position — letter and how much it varies
Violet ticks below the strip = positions where individuals differ; flat = the species' unchanging signature. 94% of positions are identical in every specimen.
Where individuals differ — all 42 variable positions, in barcode order
Each circle is a barcode variant; bigger = more specimens, colour = region. Lines join the most similar variants and the tick marks count the mutations between them — a tight cluster is one “dialect”, a long line a more divergent lineage. Click a circle to list its actual specimens.
Diversity (π)1.4%
Haplotypes4
BINs2
Most divergent pair0.61%
N.America
Closest relatives by DNA barcode
The species whose COI barcode is most similar to this one — a quick “who is this most like”. The percentage is how much the barcode differs; it approximates, but is not, the full evolutionary tree.
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★COI-5P
animal barcode
07Deep time~6.22 Ma lineage
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
DNA clock origin6.22 Ma TimeTree
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
DNA clock origin
08Occurrence & distribution
Record type12 852 records
Wild obs. + sensor11 879
Museum / vouchered968
Other5
Origin
Native41
Range
Area of Occupancy AOO3 668 km²
Depth
0–200 m sunlit1 362
200–1000 m twilight0
1–4 km midnight0
>4 km abyssal0
median 8 m · max 51 m · 1 362 records with depth
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy100% within 1 km
≤100 m 5≤1 km 10 314≤10 km 4>10 km 12
10 335 georeferenced · 1 544 without coordinates
Open the mapobservation + sensor11 879
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy43% within 1 km
≤100 m 104≤1 km 43≤10 km 164>10 km 31
342 georeferenced · 626 without coordinates
Open the institutions mapphysical evidence968
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions14 of 41 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record
112
Universidad del Valle de Guatemalalocation not on record
84
University of Texas Biodiversity Collections (UTBC)location not on record
82
FishBaselocation not on record
41
Texas Memorial Museum, Texas Natural History Collectionlocation not on record
40
North Carolina Museum of Natural Scienceslocation not on record
27
Washington, US
18
Texas Cooperative Wildlife Collectionlocation not on record
15
Tapachula, MX
13
Cambridge, US
11
UFRRJlocation not on record
11
University of Alabamalocation not on record
10
Southeastern Louisiana University, Vertebrate Museumlocation not on record
8
PUC-RSlocation not on record
7
Chicago, US
6
UNICAMPlocation not on record
6
UFESlocation not on record
6
Toronto, CA
6
Los Angeles, US
5
Universidad del Valle (UniValle)location not on record
4
Centro de Investigación y de Estudios Avanzados, Unidad Irapuato, Instituto Politécnico Nacionallocation not on record
3
CASlocation not on record
3
INMAlocation not on record
3
Museu de Zoologia da Universidade de Sao Paulolocation not on record
3
University of California San Diegolocation not on record
3
Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record
3
Champaign, US
3
San Nicolás de los Garza, MX
2
Mexico City, MX
2
USP-RPlocation not on record
2
Ann Arbor, US
2
South Kensington, GB
2
Facultad de Ciencias Biológicas y Agropecuarias, Universidad Veracruzana, Región Poza Rica-Tuxpanlocation not on record
2
Museu Paraense Emílio Goeldilocation not on record
1
Universidad de Antioquia (UdeA)location not on record
1
Wuzhou, CN
1
Museu Nacional/Universidade Federal do Rio de Janeirolocation not on record
1
University of Nebraskalocation not on record
1
New Haven, US
1
Montgomery, US
1
Florida State University Coastal and Marine Laboratorylocation not on record
1
41 institutions · 553 of 968 vouchered records shown · 7 without an institution code
09Environmental DNA78 detections
Where the DNA of Anchoa lyolepis was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Detections DNA found78
Studies independent surveys2
Countries2
Verifiable raw sequence linked68
Signal confidence: moderateweighed across independent studies, places & mapped detections
Where its DNA was found
0 of 78 detections have coordinates
Open the map2 countries0
Atlantic Ocean
How strong is each trace?
DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.
Modelled climatemodelled
−15°Ctemperature across detection sites+40°C
Temperature median11.5 °C 2.80–23.7
Seasonal swing summer↔winter20.9 °C
Max temp (day)13.5 °C 5.40–25.5
Min temp (night)9.90 °C 0.6–22.5
Precipitation90.6 mm/mo 84.2–110
Air humidity57.7 % 57.0–63.7
Vapour deficit573 Pa 322–1,088
Cloud cover48.3 % 32.3–55.8
CHELSA 1981–2010, ~9 km grid, at location & month of 72 detection points · median with p10–p90 · reflects where sampling happened, not only the true niche
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.