Sporobolus alterniflorus
(Loisel.) P.M.Peterson & Saarela · speciesAt a glance
Sources12 archives
Databases and archives Sporobolus alterniflorus's data was compiled from.
WikipediaWikimedia Foundation9 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility2 373 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI3 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics5 specimens↗
NCBIUS National Library of Medicinesequences↗
LOTUSNatural Products (Wikidata)compounds↗
NPASSNat. Product Activity & Species Sourcecompounds↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Sporobolus alterniflorus, or synonymously known as Spartina alterniflora, the smooth cordgrass, saltmarsh cordgrass, or salt-water cordgrass, is a perennial deciduous grass which is found in intertidal wetlands, especially estuarine salt marshes. It has been reclassified as Sporobolus alterniflorus after a taxonomic revision in 2014, but it is still common to see Spartina alterniflora and in 2019 an interdisciplinary team of experts coauthored a report published in the journal Ecology supporting Spartina as a genus. It grows 1 - tall and has smooth, hollow stems that bear leaves up to 20-60 cm long and 1.5 cm wide at their base, which are sharply tapered and bend down at their tips. Like its relative saltmeadow cordgrass S. patens, it produces flowers and seeds on only one side of the stalk. The flowers are a yellowish-green, turning brown by the winter. It has rhizoidal roots, which, when broken off, can result in vegetative asexual growth. The roots are an important food resource for snow geese. It can grow in low marsh (frequently inundated by the tide) as well as high marsh (less frequently inundated), but it is usually restricted to low marsh because it is outcompeted by salt meadow cordgrass in the high marsh.http://www.fs.fed.us/database/feis/plants/graminoid/spaalt/all.html USDA Forest Service Fire Effects Information System (FEIS) for Spartina alterniflora It grows in a wide range of salinities, from about 5 psu to marine (32 psu), and has been described as the "single most important marsh plant species in the estuary" of Chesapeake Bay.Lippson, AJ & RL Lippson. 2006. Life in the Chesapeake Bay, 3rd ed., p.295. Johns Hopkins Press. It is described as intolerant of shade.http://plants.usda.gov/java/profile?symbol=spal USDA NRCS PLANTS profile for Spartina alterniflora S. alterniflora is noted for its capacity to act as an environmental engineer. It grows out into the water at the seaward edge of a salt marsh, and accumulates sediment and enables other habitat-engineering species, such as mussels, to settle. This accumulation of sediment and other substrate-building species gradually builds up the level of the land at the seaward edge, and other, higher-marsh species move onto the new land. As the marsh accretes, S. alterniflora moves still further out to form a new edge. S. alterniflora grows in tallest forms at the outermost edge of a given marsh, displaying shorter morphologies up onto the landward side of the Spartina belt. S. alterniflora is native to the Atlantic coast of the Americas from Newfoundland, Canada, south to northern Argentina, where it forms a dominant part of brackish coastal saltmarshes. The caterpillars of Aaron's skipper (Poanes aaroni) have only been found on this species to date.
No narrative description available for this taxon yet.
Size & morphology16
Life cycle & reproduction31
Diet & foraging1
Habitat & environment29
Physiology & chemistry24
Uses & economy15
Other traits6
Compounds documented for Sporobolus alterniflorus across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile5 classes
Documented compounds98 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| (1R,1'S,2'S,5R,6S)-2',3-dibromo-1'-chloro-1',4,4,6-tetramethylspiro[7-oxabicyclo[4.1.0]hept-2-ene-5,4'-cyclohexane] | present | NPASS | |
| (1R,1'S,4'S,5R,5'S,6S)-3,4'-dibromo-5'-chloro-4,4,5',6-tetramethylspiro[7-oxabicyclo[4.1.0]hept-2-ene-5,2'-cyclohexane]-1'-ol | present | NPASS | |
| (1R,3R,5R,6R,8R)-5-bromo-3-[(1S)-1-bromopropyl]-8-[(Z)-pent-2-en-4-ynyl]-2,7-dioxabicyclo[4.2.1]nonane | present | NPASS | |
| (1R,3R,5R,6R,8S)-5-bromo-3-[(1S)-1-bromopropyl]-8-[(Z)-pent-2-en-4-ynyl]-2,7-dioxabicyclo[4.2.1]nonane | present | NPASS | |
| (1R,3R,6S,8R,11R)-8-bromo-4,11,12,12-tetramethyl-7-oxatricyclo[6.3.1.01,6]dodeca-4,9-diene-3,11-diol | present | NPASS | |
| (1R,4E,6S)-1-methyl-4-(6-methylhept-5-en-2-ylidene)-7-oxabicyclo[4.1.0]heptane | present | NPASS | |
| (1R,5R,7S)-9-bromo-8,8-dimethyl-11-methylidene-5-prop-1-en-2-yl-2,4-dioxabicyclo[5.3.1]undec-9-ene | present | NPASS | |
| (1R,5S,7R,8S)-8-chloro-2,2,5,8-tetramethyl-6-oxatricyclo[5.3.1.01,5]undec-3-ene-3-carbaldehyde | present | NPASS | |
| (1R,6S,8R,11R)-3,8-dibromo-4,11,12,12-tetramethyl-7-oxatricyclo[6.3.1.01,6]dodeca-3,9-dien-11-ol | present | NPASS | |
| (1R,6S,8R,11R)-8-bromo-4,11,12,12-tetramethyl-7-oxatricyclo[6.3.1.01,6]dodeca-3,9-dien-11-ol | present | NPASS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Sporobolus alterniflorus has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Sporobolus alterniflorus carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 6218×GoaT · Kew Plant DNA C-values Database · CCDB · brit-fl · CCDB · nw-europe-fl +6
2n 561×CCDB · book-atlas-flowering-plants
n 313×CCDB · book-ipcn67-71
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
Record type2 373 records
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions12 of 25 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 58 |
| Auckland, NZ | 34 |
| Christchurch, NZ | 16 |
| IHCantabrialocation not on record | 14 |
| Wuzhou, CN | 11 |
| Montréal, CA | 5 |
| University of Stellenboschlocation not on record | 4 |
| Rotorua, NZ | 3 |
| New Brunswick, US | 3 |
| BClocation not on record | 2 |
| Dekalb, US | 2 |
| State University of New York atlocation not on record | 1 |
| University of Southern Mississippilocation not on record | 1 |
| MeiseBGlocation not on record | 1 |
| Santa Teresa, BR | 1 |
| Université Lavallocation not on record | 1 |
| Pittsburg, US | 1 |
| INMAlocation not on record | 1 |
| WINlocation not on record | 1 |
| Research Collection of B. A. Bennettlocation not on record | 1 |
| University of South Carolina Salkehatchielocation not on record | 1 |
| Brasília, BR | 1 |
| Cenargenlocation not on record | 1 |
| St. Augustine, TT | 1 |
| Fort Worth, US | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Sporobolus alterniflorus was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.