Spheniscus demersus
(Linnaeus, 1758) · speciesAt a glance
Sources14 archives
Databases and archives Spheniscus demersus's data was compiled from.
WikipediaWikimedia Foundation19 languages↗
Animal Diversity WebUniv. of Michigan MZspecies account↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility13 813 records↗
OBISOcean Biodiversity Information System620 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI1 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics22 specimens↗
Open Tree of LifeOpenTreephylogeny backbone↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
NCBIUS National Library of Medicinegenome & karyotype↗
Paleobiology DatabasePBDB consortiumfossil record↗
WikidataWikimedia Foundationstructured facts↗
IOC World Bird ListIOCbird checklist↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
The African penguin (Spheniscus demersus), also known as Cape penguin or South African penguin, is a species of penguin confined to southern African waters. Like all extant penguins, it is flightless, with a streamlined body and wings stiffened and flattened into flippers for a marine habitat. Adults weigh an average of and are tall. The species has distinctive pink patches of skin above the eyes and a black facial mask. The body's upper parts are black and sharply delineated from the white underparts, which are spotted and marked with a black band. The pink glands above their eyes help them with thermoregulation. To cope with changing temperatures, blood is sent to the glands to be cooled by the air. The African penguin is a pursuit diver and feeds primarily on fish and squid. Once extremely numerous, the African penguin is declining rapidly due to a combination of several threats and is classified as endangered. It is a charismatic species and is popular with tourists. Other vernacular names of the species include black-footed penguin and jackass penguin, due to the species' loud, donkey-like noise, although several related species of South Jackass penguins produce the same sound. They can be found along the coast of South Africa and Namibia.
No narrative description available for this taxon yet.
Size & morphology15
Life cycle & reproduction8
Diet & foraging4
Habitat & environment6
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Spheniscus demersus has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
Besides the big genome in the nucleus, cells carry a small, circular loop of DNA inside the cell's energy factories — the mitochondria. It is inherited almost only from the mother and is a leftover from ancient bacteria that moved into the cell. The mitochondrial markers above (ND*, COX, CYTB…) are read from exactly this loop. Outer ring = one strand, inner ring = the other.
The complete instruction manual Spheniscus demersus carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Spheniscus demersus. Above itBeside it, each dot is one dated fossil find — few enough to count, so they are drawn individually rather than as a graph. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil. Where the DNA reaches further back than the oldest fossil, the gap is hatched: the ghost lineage. It means the lineage was already out there, but has left us nothing we have dug up yet.
How it livedPBDB
Record type14 438 records
Origin
Range
Depth
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions14 of 19 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Chicago, US | 12 |
| Geneva, CH | 9 |
| Toronto, CA | 5 |
| Cambridge, US | 4 |
| Vancouver, CA | 4 |
| South Kensington, GB | 4 |
| CASlocation not on record | 3 |
| Seattle, US | 3 |
| New Haven, US | 2 |
| Ann Arbor, US | 2 |
| University of Nebraska State Museumlocation not on record | 2 |
| Tilburg, NL | 1 |
| US | 1 |
| Natural History Museum Rotterdamlocation not on record | 1 |
| Instituto de Investigação Científica Tropicallocation not on record | 1 |
| Zografou, GR | 1 |
| Brussels, BE | 1 |
| RBINS-Scientific Heritagelocation not on record | 1 |
| München, DE | 1 |
Where the DNA of Spheniscus demersus was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.