Spergularia rubra
(L.) J.Presl & C.Presl · speciesAt a glance
Sources13 archives
Databases and archives Spergularia rubra's data was compiled from.
WikipediaWikimedia Foundation13 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility111 309 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI21 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics44 specimens↗
NCBIUS National Library of Medicinesequences↗
LOTUSNatural Products (Wikidata)compounds↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
PloiDBPloidy Databasegenome & karyotype
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Spergularia rubra, the red sandspurry or red sand-spurrey, is a plant species in the family Caryophyllaceae. It is native to Europe, Asia and North Africa, and it is present on other continents, including North and South America and Australia, as an introduced species and in many areas a common weed. It grows in a wide variety of habitat types. It is an annual or perennial herb producing a slender, glandular stem up to about 25 centimeters long. It is lined with slightly fleshy linear or threadlike leaves each under 2 centimeters long. The leaves may be tipped with hard points or spines, and they are accompanied by shiny white lance-shaped stipules. Flowers occur in the leaf axils and at the tips of the stems. They have hairy, glandular sepals and five round-oval pink petals.
No narrative description available for this taxon yet.
Size & morphology23
Life cycle & reproduction17
Diet & foraging2
Habitat & environment15
Physiology & chemistry6
Other traits3
Compounds documented for Spergularia rubra across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile1 class
Documented compounds4 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| 5,7-Dihydroxy-2-(4-hydroxyphenyl)-6-(3,4,5-trihydroxyoxan-2-yl)chromen-4-one | present | LOTUS | |
| 5-Hydroxy-2-(4-hydroxyphenyl)-7-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-(3,4,5-trihydroxyoxan-2-yl)chromen-4-one | present | LOTUS | |
| 6-[4,5-Dihydroxy-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]-5-hydroxy-2-(4-hydroxyphenyl)-7-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one | present | LOTUS | |
| chrysoeriol 6-C-hexoside-8-C-hexoside | present | LOTUS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Spergularia rubra has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Spergularia rubra carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 3640×GoaT · DTOL Flowering Plants Estimates Kew · CCDB · slov-fl · CCDB · brit-fl +12
2n 186×CCDB · iber-fl · CCDB · ipcn-api-dl · CCDB · book-ipcn67-71 +2
2n 271×CCDB · book-ipcn67-71
2n 541×CCDB · CromoCat 2015
n 183×CCDB · book-ipcn67-71 · CCDB · CromoCat 2015
n 92×CCDB · book-ipcn75-78 · CCDB · CromoCat 2015
polyploid inferred1×PloiDB · genus-scale
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
Record type111 309 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions176 of 313 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Uniwersytet Wrocławskilocation not on record | 873 |
| Helsinki, FI | 709 |
| Olocation not on record | 484 |
| LDlocation not on record | 345 |
| BRNUlocation not on record | 306 |
| BIO-UNIPIlocation not on record | 305 |
| BFLlocation not on record | 247 |
| South Kensington, GB | 247 |
| Moscow State Universitylocation not on record | 242 |
| Bergen, NO | 202 |
| Berlin, DE | 187 |
| Oulu, FI | 161 |
| MeiseBGlocation not on record | 155 |
| WTUlocation not on record | 148 |
| Museo Entomologico de Leonlocation not on record | 145 |
| KMNlocation not on record | 143 |
| Turku, FI | 126 |
| Brussel, BE | 124 |
| Canberra, AU | 107 |
| Oskarshamn, SE | 101 |
| Corvallis, US | 97 |
| Christchurch, NZ | 97 |
| Tartu, EE | 95 |
| Provincia di Livornolocation not on record | 93 |
| SLU Artdatabankenlocation not on record | 90 |
| Adelaide, AU | 83 |
| Pullman, US | 81 |
| Bronx, US | 78 |
| CICYTEXlocation not on record | 73 |
| Adam Mickiewicz University in Poznańlocation not on record | 73 |
| Riverside, US | 71 |
| MAlocation not on record | 70 |
| Görlitz, DE | 69 |
| DOI/NPS, Little Rock Central High School National Historic Sitelocation not on record | 68 |
| Mount Annan, AU | 68 |
| TUR-Alocation not on record | 68 |
| Claremont, US | 66 |
| Victoria, CA | 65 |
| BDBClocation not on record | 64 |
| València, ES | 64 |
| BClocation not on record | 61 |
| Moscow, US | 61 |
| Salzburg, AT | 60 |
| Uniwersytet Warszawskilocation not on record | 56 |
| Acadia Universitylocation not on record | 53 |
| Durham, US | 52 |
| Trondheim, NO | 52 |
| Entomological Society of Latvialocation not on record | 51 |
| Vancouver, CA | 51 |
| Zürich, CH | 50 |
| College of the Atlantic, Museumlocation not on record | 50 |
| GZUlocation not on record | 49 |
| San Luis Obispo, US | 48 |
| Jyväskylä, FI | 47 |
| Zürich, CH | 46 |
| Davis, US | 46 |
| Arcata, US | 45 |
| Madison, US | 44 |
| Kensington, AU | 42 |
| Auckland, NZ | 42 |
| Wellington, NZ | 40 |
| Bern, CH | 39 |
| Hobart, AU | 39 |
| New Haven, US | 39 |
| DBF-NHMDlocation not on record | 36 |
| Burlington, US | 36 |
| Kuopio, FI | 36 |
| Brisbane, AU | 36 |
| Philadelphia, US | 35 |
| UIBlocation not on record | 35 |
| GBS RAN - Glavny Botanichesky Sad Rossijskoj Akademii Nauklocation not on record | 34 |
| Missoula, US | 33 |
| Badajoz, ES | 33 |
| San Diego, US | 32 |
| Boise, US | 31 |
| Canadian Department of Agriculturelocation not on record | 31 |
| Philadelphia, US | 29 |
| Santa Barbara, US | 28 |
| Angwin, US | 28 |
| Denver, US | 24 |
| Barcelona, ES | 23 |
| DOI/NPS, Colonial National Historical Parklocation not on record | 23 |
| Saint John, CA | 23 |
| Wlocation not on record | 23 |
| GJOlocation not on record | 23 |
| Chongqing Museumlocation not on record | 22 |
| Museum Ludovicae Ulricae, Zoology Institute of the University of Uppsalalocation not on record | 22 |
| Uppsala, SE | 22 |
| Provo, US | 21 |
| Córdoba, ES | 21 |
| Uniwersytet Jagiellońskilocation not on record | 21 |
| Caldwell, US | 20 |
| Bozeman, US | 20 |
| PRClocation not on record | 20 |
| Vitoria, ES | 20 |
| Salamanca, ES | 18 |
| San Sebastián, ES | 18 |
| Universidad del Pais Vasco (UPV/EHU)location not on record | 17 |
| Frankfurt am Main | 17 |
| CJBGlocation not on record | 17 |
| St. Paul, US | 17 |
| NSW Dept of Planning, Industry and Environmentlocation not on record | 17 |
| Montréal, CA | 16 |
| Porvoo, FI | 16 |
| Québec, CA | 16 |
| Pocatello, US | 16 |
| KIRMlocation not on record | 15 |
| Armidale, AU | 15 |
| Université Lavallocation not on record | 15 |
| Tallinn, EE | 15 |
| Odawara, JP | 15 |
| NSW Office of Environment and Heritagelocation not on record | 15 |
| CASlocation not on record | 14 |
| Mlocation not on record | 14 |
| JP | 14 |
| Musee des Dinosaures d'Esperaza (Aude)location not on record | 13 |
| Cape Town, ZA | 13 |
| ISAlocation not on record | 13 |
| Tacoma, US | 13 |
| Madrid, ES | 13 |
| Green Bay, US | 12 |
| Paris, FR | 12 |
| Rotorua, NZ | 12 |
| Tsukuba, JP | 12 |
| Staatliches Museum fuer Naturkunde Karlsruhe (State Museum of Natural History)location not on record | 12 |
| Portland, US | 12 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 11 |
| Otaru, JP | 11 |
| Beijing, CN | 10 |
| US | 10 |
| Fukushima Universitylocation not on record | 10 |
| Logan, US | 10 |
| Ann Arbor, US | 9 |
| Pamplona, ES | 9 |
| Pamplona, ES | 9 |
| College Park, US | 9 |
| Uniwersytet Śląski w Katowicachlocation not on record | 9 |
| Nagano City, JP | 9 |
| Ernst-Moritz-Arndt-Universitat Greifswaldlocation not on record | 9 |
| TROMlocation not on record | 9 |
| IDElocation not on record | 9 |
| Wuzhou, CN | 9 |
| University of Stellenboschlocation not on record | 9 |
| Kushiro City Museumlocation not on record | 9 |
| Santa Cruz, US | 8 |
| Irvine, US | 8 |
| Stockholm, SE | 8 |
| Tampa, US | 8 |
| Granada, ES | 8 |
| Fulda, DE | 8 |
| San Francisco, US | 7 |
| SZUlocation not on record | 7 |
| Flagstaff, US | 7 |
| Natural History Museum Rotterdamlocation not on record | 7 |
| nbflocation not on record | 7 |
| Bloomington, US | 6 |
| LfUlocation not on record | 6 |
| Ashland, US | 6 |
| Tilburg, NL | 6 |
| UChlocation not on record | 6 |
| Saint Louis, US | 6 |
| Orem, US | 6 |
| QVMAGlocation not on record | 6 |
| Sanda, JP | 6 |
| Tokushima, JP | 5 |
| Museo civico di Storia naturale Giacomo Doria di Genova | Giacomo Doria Natural History Museum in Genoalocation not on record | 5 |
| BSBIlocation not on record | 5 |
| Kingston, US | 5 |
| Phoenix, US | 5 |
| Nunoa, Santiago, CL | 5 |
| QAUlocation not on record | 5 |
| Smithfield, AU | 5 |
| No collectionlocation not on record | 5 |
| Dresden, DE | 5 |
| Bourges, FR | 5 |
| San Jose, US | 5 |
| Anchorage, US | 5 |
| Tula State Lev Tolstoy Pedagogical Universitylocation not on record | 5 |
| Institute of the biological problems of the North FEB RASlocation not on record | 5 |
| Alicante, ES | 5 |
| KNFYlocation not on record | 5 |
| Bangkok, TH | 4 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 4 |
| H-Schuhwlocation not on record | 4 |
| Sion, CH | 4 |
| Kunming, CN | 4 |
| UGentlocation not on record | 4 |
| National Museum Waleslocation not on record | 4 |
| H-Adlerlocation not on record | 4 |
| Kew, GB | 4 |
| PrivatHerblocation not on record | 4 |
| Forssa, FI | 4 |
| Batemans Bay, AU | 4 |
| Whitehorse, CA | 4 |
| Northridge, US | 3 |
| Dekalb, US | 3 |
| Severin-McDaniel Insect Collectionlocation not on record | 3 |
| Pretoria, ZA | 3 |
| Philadelphia, US | 3 |
| Academy of Sciences of the Republic of Uzbekistanlocation not on record | 3 |
| Rishon Le Zion, IL | 3 |
| Conservatoire botanique national du Bassin parisienlocation not on record | 3 |
| Sendai, JP | 3 |
| Finnish Museum of Natural Historylocation not on record | 3 |
| Porrentruy, CH | 3 |
| Pittsburg, US | 3 |
| Toyama, JP | 3 |
| Institut und Museum fuer Geologie und Palaeontologielocation not on record | 3 |
| National Institute of Biological Resourceslocation not on record | 3 |
| DOI/NPS, Greenbelt Parklocation not on record | 3 |
| Naturalis Biodiversity Centerlocation not on record | 3 |
| Fort Bragg, US | 3 |
| ASUlocation not on record | 3 |
| Durango, US | 3 |
| Keene State Universitylocation not on record | 3 |
| Science Museum of Minnesotalocation not on record | 3 |
| H-AkrKGlocation not on record | 2 |
| Göteborg, SE | 2 |
| Staten Island, US | 2 |
| Phyletisches Museum Jenalocation not on record | 2 |
| NMBU:MINAlocation not on record | 2 |
| Parkville, AU | 2 |
| Wollongong, AU | 2 |
| Chadron, US | 2 |
| Lausanne, CH | 2 |
| Fredericton Stock Culture Collectionlocation not on record | 2 |
| Weber State Universitylocation not on record | 2 |
| Bando, JP | 2 |
| Museo della Bonifica di San Donà di Piavelocation not on record | 2 |
| CJBNlocation not on record | 2 |
| JBSlocation not on record | 2 |
| Namur, BE | 2 |
| University of Wisconsinlocation not on record | 2 |
| KR | 2 |
| DULlocation not on record | 2 |
| US | 2 |
| BGPAlocation not on record | 2 |
| Davenport, US | 2 |
| DOI/NPS, San Juan Island National Historical Parklocation not on record | 2 |
| The Tula Region State Institution of Culture "Tula Museum Association"location not on record | 2 |
| GMBAlocation not on record | 2 |
| SEFlocation not on record | 2 |
| DOI/NPS, Mount Rainier National Parklocation not on record | 2 |
| Kiritappu Wetland National Trustlocation not on record | 2 |
| Little Rock, US | 2 |
| John T. Waterhouse Herbariumlocation not on record | 2 |
| Museo Achille Folettolocation not on record | 2 |
| Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record | 2 |
| Albuquerque, US | 2 |
| EL PASO, US | 2 |
| H-Hohlalocation not on record | 2 |
| Madrid, ES | 1 |
| Kochi, JP | 1 |
| JBRJlocation not on record | 1 |
| DOI/FWS, Kenai National Wildlife Refugelocation not on record | 1 |
| San Diego Natural History Museum, Herbariumlocation not on record | 1 |
| Nijmegen, NL | 1 |
| Umeå Universitylocation not on record | 1 |
| Pacific Lutheran Universitylocation not on record | 1 |
| University of New Hampshirelocation not on record | 1 |
| Grand Junction, US | 1 |
| Xiamen, CN | 1 |
| Whitewater, US | 1 |
| University of Alberta Museumslocation not on record | 1 |
| Boumlocation not on record | 1 |
| US | 1 |
| SNSNMClocation not on record | 1 |
| Bend, US | 1 |
| Podgorica, ME | 1 |
| University of South Dakotalocation not on record | 1 |
| La Trobe Universitylocation not on record | 1 |
| ESP109location not on record | 1 |
| STNFlocation not on record | 1 |
| Cambridge, US | 1 |
| DOI/NPS, Mississippi National River & Recreation Arealocation not on record | 1 |
| Palmerston North, NZ | 1 |
| Edinburgh, GB | 1 |
| Sede dell'Orto botanico del Museo di Storia naturale dell'Università degli Studi di Parmalocation not on record | 1 |
| San Bernardino, US | 1 |
| Nishihara, JP | 1 |
| FLASlocation not on record | 1 |
| UoB-IBlocation not on record | 1 |
| Karlsruhe, DE | 1 |
| Brookings, US | 1 |
| KNFHClocation not on record | 1 |
| Henderson, US | 1 |
| Sevilla, ES | 1 |
| Chiba, JP | 1 |
| Universidad de La Salle (La Salle)location not on record | 1 |
| Uniwersytet Rolniczy im. Hugona Kołłątaja w Krakowielocation not on record | 1 |
| RJBJCIlocation not on record | 1 |
| Toronto, CA | 1 |
| Truckee, US | 1 |
| University of British Columbialocation not on record | 1 |
| Yellowstone National Park Herbariumlocation not on record | 1 |
| Research Collection of B. A. Bennettlocation not on record | 1 |
| New Brunswick, US | 1 |
| BioFokuslocation not on record | 1 |
| Ivano-Frankove, UA | 1 |
| Sagamihara, JP | 1 |
| Jackson, US | 1 |
| Yangling, CN | 1 |
| Rovaniemi, FI | 1 |
| Columbia, US | 1 |
| Taipei, TW | 1 |
| Monastir, TN | 1 |
| Hunan Geological Museumlocation not on record | 1 |
| ESP003location not on record | 1 |
| Valdosta State Universitylocation not on record | 1 |
| University of British Columbia, Herbariumlocation not on record | 1 |
| Royal Botanic Garden Edinburghlocation not on record | 1 |
| Obihiro Centennial City Museumlocation not on record | 1 |
| Portland, US | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Spergularia rubra was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.