Image taken at 100x Sordaria fimicola is a species of microscopic fungus. It is commonly found in the feces of herbivores. Sordaria fimicola is often used in introductory biology and mycology labs because it is easy to grow on nutrient agar in dish cultures. The genus Sordaria, closely related to Neurospora and Podospora, is a member of the large class Sordariomycetes, or flask-fungi. The natural habitat of the three species of Sordaria that have been the principal subjects in genetic studies is dung of herbivorous animals. The species S. fimicola is common and worldwide in distribution. The species of Sordaria are similar morphologically, producing black perithecia containing asci with eight dark ascospores in a linear arrangement. These species share a number of characteristics that are advantageous for genetic studies. They all have a short life cycle, usually 7–12 days, and are easily grown in culture. Most species are self-fertile and each strain is isogenic. All kinds of mutants are easily induced and readily obtainable with particular ascospore color mutants. These visual mutants aid in tetrad analysis, especially in analysis of intragenic recombination. The most common form of S. fimicola is a dark brown. Certain mutants are grey or tan. A common experiment for an introductory biology lab class is to cross one of the mutant types with a wild type and observe the ratio of coloring in the offspring. This experiment illustrates the concepts of genetic inheritance in a haploid organism. The eight ascospores are produced inside an ascus. Sordaria squashes can give us information about crossing over during meiosis. If no crossing over then there is a 4:4 pattern. 4 black spores, and 4 tan spores all lined up. If crossing over does occur there is a 2:2:2:2 pattern visible, or a 2:4:2 pattern. Another common lab use is to observe meiosis and mitosis in the fruit bodies, called perithecia. An interesting feature of S. fimicola is that its fruit body is phototrophic. Thus, as it grows the stalk will bend toward a light source and when the sac bursts, the spores are shot towards the light.
No narrative description available for this taxon yet.
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Sordaria fimicola has left across the world's sequence archives.
At a glance
DNA specimens31
Marker genes4
GenBank sequences10
eDNA detections36
Countries12
The DNA barcodea real sequence read deposited for this species
Sordaria fimicola isolate C 74 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
Marker genes sequenced
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★ITS10★ITS1★ITS25-8S
fungal barcodemarker
07Deep time~61.5 Ma lineage
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
DNA clock origin61.5 Ma TimeTree
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The dashed rules marked ✦ are the five great mass extinctions. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
DNA clock originmass extinction
08Occurrence & distribution
Record type715 records
Wild obs. + sensor372
Museum / vouchered332
Cultivated / captive1
Other10
Origin
Native1
Range
Area of Occupancy AOO1 988 km²
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy34% within 1 km
≤100 m 79≤1 km 42≤10 km 228>10 km 2
351 georeferenced · 21 without coordinates
Open the mapobservation + sensor372
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy24% within 1 km
≤100 m 8≤1 km 36≤10 km 93>10 km 47
184 georeferenced · 148 without coordinates
Open the institutions mapphysical evidence332
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Coordinate accuracy
no georeferenced coordinates · 1 records without
Open the mapnot free-living1
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions20 of 45 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Toronto, CA
50
Uppsala, SE
48
Bernard Price Institute for Palaeontological Researchlocation not on record
36
Bronx, US
31
BDBClocation not on record
15
Tartu, EE
14
UFPElocation not on record
13
Auckland, NZ
9
Southeastern Louisiana University, Vertebrate Museumlocation not on record
9
Olocation not on record
9
DPIlocation not on record
5
Catholic University of Pekinglocation not on record
5
Madison, US
4
Grupo Actinomicetales Merida Facultad de Medicinalocation not on record
4
Tilburg, NL
4
PHlocation not on record
3
SLU Artdatabankenlocation not on record
3
Lincoln, US
3
Champaign, US
2
WU-MYClocation not on record
2
Chicago, US
2
FLASlocation not on record
2
ILLSlocation not on record
2
Vancouver, CA
2
MeiseBGlocation not on record
2
McWane Science Centerlocation not on record
2
Parkville, AU
1
Senckenberg Gesellschaft für Naturforschung: Senckenberg Forschungsinstitut und Naturmuseumlocation not on record
1
FAMCALlocation not on record
1
Museo Entomologico de Leonlocation not on record
1
Göteborg, SE
1
Ann Arbor, US
1
Université de Montréal Biodiversity Centrelocation not on record
1
Pullman, US
1
San Sebastián, ES
1
TENN-Flocation not on record
1
nsnflocation not on record
1
California State University, East Baylocation not on record
1
University of Athens, Hellenic Collection of Pathogenic Fungilocation not on record
1
Museo civico di Storia naturale Giacomo Doria di Genova | Giacomo Doria Natural History Museum in Genoalocation not on record
1
Gijón, ES
1
Museum Ludovicae Ulricae, Zoology Institute of the University of Uppsalalocation not on record
1
Salzburg, AT
1
Canberra, AU
1
Helsinki, FI
1
45 institutions · 300 of 332 vouchered records shown · 31 without an institution code
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
09Environmental DNA36 detections
Where the DNA of Sordaria fimicola was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Detections DNA found36
Studies independent surveys3
Countries5
Verifiable raw sequence linked9
Signal confidence: moderateweighed across independent studies, places & mapped detections
Where its DNA was found
0 of 36 detections have coordinates
Open the map5 countries0
Forest
How strong is each trace?
DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.
Modelled climatemodelled
−15°Ctemperature across detection sites+40°C
Temperature median13.2 °C 9.40–15.6
Seasonal swing summer↔winter21.0 °C
Max temp (day)16.5 °C 12.9–20.0
Min temp (night)9.20 °C 5.40–12.3
Precipitation98.7 mm/mo 35.2–128
Air humidity60.3 % 56.3–63.2
Moisture balance10.5 mm/mo -53.3–62.4
Vapour deficit614 Pa 426–901
Wind speed2.50 m/s 2.00–3.70
Cloud cover48.7 % 38.7–56.7
CHELSA 1981–2010, ~9 km grid, at location & month of 13 detection points · median with p10–p90 · reflects where sampling happened, not only the true niche
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.