Scrophularia californica is a flowering plant in the figwort family which is known by the common names California figwort and California bee plant. It is native to the western United States, including many habitats in California, and in British Columbia.
No narrative description available for this taxon yet.
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Scrophularia californica has left across the world's sequence archives.
At a glance
DNA specimens9
Marker genes5
GenBank sequences7
eDNA detections7
Countries3
The DNA barcodea real sequence read deposited for this species
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★matK2★rbcL2★rbcLa★ITS3★ITS2
plant barcodefungal barcode
06Genome at a glanceCCDB
The complete instruction manualScrophularia californica carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
Chromosomes2n = 94 n = 47
Ploidypolyploid inferred
Chromosome-count records — grouped by value · 2n = full set, n = gamete · click a value for sources & references
n 451×CCDB · Cave1962
CCDB · Cave1962 — Shaw 1962
n 471×CCDB · Cave1962
CCDB · Cave1962 — Shaw 1962
Ploidy records — measured levels and diploid/polyploid inferences · click for sources
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
DNA clock origin0.47 Ma TimeTree
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
DNA clock origin
08Occurrence & distribution
Record type14 283 records
Wild obs. + sensor12 825
Museum / vouchered1 458
Origin
Native82
Introduced1
Range
Area of Occupancy AOO14 192 km²
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy93% within 1 km
≤100 m 8 254≤1 km 1 040≤10 km 425>10 km 234
9 953 georeferenced · 2 872 without coordinates
Open the mapobservation + sensor12 825
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy58% within 1 km
≤100 m 64≤1 km 372≤10 km 301>10 km 16
753 georeferenced · 705 without coordinates
Open the institutions mapphysical evidence1 458
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions50 of 70 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
San Diego, US
306
Riverside, US
115
Santa Barbara, US
109
Claremont, US
107
San Luis Obispo, US
67
Davis, US
58
US
58
Corvallis, US
52
Arcata, US
39
Severin-McDaniel Insect Collectionlocation not on record
27
Pullman, US
27
Santa Cruz, US
27
WTUlocation not on record
26
Los Angeles, US
24
Long Beach, US
23
Canadian Department of Agriculturelocation not on record
21
Angwin, US
19
Irvine, US
19
DOI/NPS, Little Rock Central High School National Historic Sitelocation not on record
14
Northridge, US
11
EL PASO, US
10
ASUlocation not on record
10
CASlocation not on record
10
University of Stellenboschlocation not on record
7
Wuzhou, CN
7
Portland, US
6
Tacoma, US
6
San Bernardino, US
4
Mexico City, MX
4
Bronx, US
4
Phoenix, US
4
Bloomington, US
4
Logan, US
3
Boise, US
3
Badajoz, ES
3
Vancouver, CA
2
DOI/NPS, Colonial National Historical Parklocation not on record
2
Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record
2
Turlock, US
2
Flagstaff, US
2
Ashland, US
2
Portland, US
2
Fort Worth, US
2
Victoria, CA
2
Provo, US
2
San Jose, US
2
San Angelo, US
1
MeiseBGlocation not on record
1
Moscow, US
1
AUAlocation not on record
1
Cambridge, US
1
GAlocation not on record
1
Karlsruhe, DE
1
Weber State Universitylocation not on record
1
Chongqing Museumlocation not on record
1
STNFlocation not on record
1
Tempe, US
1
Wellington, NZ
1
Durango, MX
1
University of British Columbia, Herbariumlocation not on record
1
Brookings, US
1
Institut und Museum fuer Geologie und Palaeontologielocation not on record
1
Bozeman, US
1
Fredericton Stock Culture Collectionlocation not on record
1
Pacific Lutheran Universitylocation not on record
1
Ensenada, MX
1
La Paz, MX
1
Columbia, US
1
Madison, US
1
Museo Entomologico de Leonlocation not on record
1
70 institutions · 1 280 of 1 458 vouchered records shown · 178 without an institution code
09Environmental DNA7 detections
Where the DNA of Scrophularia californica was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Detections DNA found7
Studies independent surveys1
Countries3
Signal confidence: weakweighed across independent studies, places & mapped detections
Where its DNA was found
0 of 7 detections have coordinates
Open the map3 countries0
Oak Woodland/Chaparral and canyon bottom wit…
How strong is each trace?
DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.
Modelled climatemodelled
−15°Ctemperature across detection sites+40°C
Temperature median12.5 °C 9.20–18.6
Seasonal swing summer↔winter14.3 °C
Max temp (day)13.8 °C 12.3–25.3
Min temp (night)11.4 °C 6.00–13.4
Precipitation58.1 mm/mo 13.6–107
Air humidity64.0 % 52.7–66.4
Moisture balance-4.10 mm/mo
Vapour deficit475 Pa 454–1,053
Wind speed3.70 m/s
Cloud cover41.9 % 21.7–41.9
CHELSA 1981–2010, ~9 km grid, at location & month of 3 detection points · median with p10–p90 · reflects where sampling happened, not only the true niche
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.