Rhizocarpon geographicum
(L.) DC. · speciesAt a glance
Sources12 archives
Databases and archives Rhizocarpon geographicum's data was compiled from.
WikipediaWikimedia Foundation10 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility25 008 records↗
OBISOcean Biodiversity Information System169 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI78 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics76 specimens↗
NCBIUS National Library of Medicinesequences↗
NPASSNat. Product Activity & Species Sourcecompounds↗
Open Tree of LifeOpenTreephylogeny backbone↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
Catalogue of LifeCOLtaxonomy↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Rhizocarpon geographicum (the map lichen) is a species of lichen, which grows on rocks in mountainous areas of low air pollution. Each lichen is a flat patch bordered by a black line of fungal hyphae. These patches grow adjacent to each other, leading to the appearance of a map or a patchwork field. When circular, or roughly circular, the diameter of this lichen species has been widely used to help determining the relative age of deposits, e.g. moraine systems, thus revealing evidence of glacial advances. The process is termed lichenometry. This technique is generally attributed to the work of Roland Beschel in the Alps Beschel, R. E. 1950. Flechten als Altersmaßstab rezenter Moränen.Zeitschrift für Gletscherkunde und Glazialgeologie NF, 1:151-62. (Translated by W. Barr as Lichens as a measure of the age of recent moraines. Arctic and Alpine Research, 5, 303-309) Lichenometry is based on the assumption that the largest lichen growing on a rock is the oldest individual. Generally, the five largest lichen thalli diameters are taken, although several statistical methods have been used. If the growth rate is known, the maximum lichen size will give a minimum age for when this rock was deposited. The growth rate curve, a graph of age of a lichen against the date of the substrate on which it is found has to be constructed for an area. Beschel originally used gravestones to produce a calibration curve. Growth rates for different areas and species can be obtained by measuring maximum lichen sizes on substrates of known age, such as gravestones, historic or prehistoric rock buildings, or moraines of known age (e.g. those deposited during the Little Ice Age).
No narrative description available for this taxon yet.
Habitat & environment1
Compounds documented for Rhizocarpon geographicum across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile2 classes
Documented compounds3 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| (1R,5S,5'S,6S,9R)-5'-(furan-3-yl)-4-methylidenespiro[10-oxatricyclo[7.2.1.01,6]dodecane-5,3'-oxolane]-2',11-dione | present | NPASS | |
| 2-Hydroxy-4-Methoxy-3,6-Dimethylbenzoic Acid | present | NPASS | |
| methyl (1S,4R,5R,7S,9S,11S,13R,16R,17R)-7-(furan-3-yl)-4-methyl-8,10,12-trioxapentacyclo[11.3.1.01,11.05,9.05,16]heptadecane-17-carboxylate | present | NPASS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Rhizocarpon geographicum has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Rhizocarpon geographicum carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
Record type25 177 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions71 of 148 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Madison, US | 625 |
| Olocation not on record | 415 |
| Canberra, AU | 300 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 278 |
| Uppsala, SE | 276 |
| LDlocation not on record | 186 |
| ASUlocation not on record | 180 |
| Durham, US | 175 |
| St. Paul, US | 151 |
| AASlocation not on record | 150 |
| Bergen, NO | 134 |
| Polar-Alpine Botanical Garden-Institutelocation not on record | 120 |
| Berlin, DE | 105 |
| DOI/NPS, Colonial National Historical Parklocation not on record | 103 |
| UNITOlocation not on record | 101 |
| Senckenberg Gesellschaft für Naturforschung: Senckenberg Forschungsinstitut und Naturmuseumlocation not on record | 94 |
| Helsinki, FI | 84 |
| Hobart, AU | 82 |
| Université Lavallocation not on record | 81 |
| 80 | |
| Museo Entomologico de Leonlocation not on record | 77 |
| Bronx, US | 75 |
| British Antarctic Surveylocation not on record | 72 |
| Chicago, US | 71 |
| Philadelphia, US | 71 |
| University of Stellenboschlocation not on record | 68 |
| Clocation not on record | 64 |
| TROMlocation not on record | 62 |
| Bozeman, US | 61 |
| McWane Science Centerlocation not on record | 60 |
| US | 59 |
| Trondheim, NO | 57 |
| GZUlocation not on record | 53 |
| WTUlocation not on record | 51 |
| Vancouver, CA | 46 |
| BDBClocation not on record | 44 |
| Museo Achille Folettolocation not on record | 44 |
| Mlocation not on record | 44 |
| BClocation not on record | 39 |
| TSBlocation not on record | 36 |
| Auckland, NZ | 35 |
| València, ES | 34 |
| AADClocation not on record | 30 |
| Edmonton, CA | 29 |
| Salzburg, AT | 26 |
| MNHWlocation not on record | 26 |
| ILLSlocation not on record | 23 |
| University of Manitobalocation not on record | 23 |
| Boise, US | 22 |
| Museo civico di Storia naturale Giacomo Doria di Genova | Giacomo Doria Natural History Museum in Genoalocation not on record | 22 |
| Ann Arbor, US | 21 |
| PHlocation not on record | 21 |
| Metsähallituslocation not on record | 21 |
| University of Gdansklocation not on record | 18 |
| Dhaka, BD | 18 |
| Entomological Society of Latvialocation not on record | 17 |
| Barcelona, ES | 17 |
| Kensington, AU | 16 |
| Bando, JP | 16 |
| Göteborg, SE | 16 |
| Stockholm, SE | 15 |
| Christchurch, NZ | 15 |
| SLU Artdatabankenlocation not on record | 15 |
| Minia, EG | 14 |
| Wuzhou, CN | 13 |
| South Kensington, GB | 13 |
| Vitoria, ES | 13 |
| Museum Ludovicae Ulricae, Zoology Institute of the University of Uppsalalocation not on record | 12 |
| Staatsarchiv Urilocation not on record | 12 |
| BG-NMNHSlocation not on record | 11 |
| Fort Hayslocation not on record | 11 |
| Knoxville, US | 11 |
| Uniwersytet Wrocławskilocation not on record | 10 |
| PRClocation not on record | 10 |
| Klostermuseum Disentislocation not on record | 10 |
| New Haven, US | 10 |
| Institute of the Industrial Ecology Problems of the North of Kola Science Center of the Russian Academy of Sciences.location not on record | 9 |
| CLUlocation not on record | 9 |
| Royal Botanic Garden Edinburghlocation not on record | 9 |
| MeiseBGlocation not on record | 8 |
| Mount Annan, AU | 8 |
| Wellington, NZ | 8 |
| Madrid, ES | 8 |
| FLASlocation not on record | 8 |
| UFMSlocation not on record | 8 |
| Turku, FI | 7 |
| Australian Antarctic Divisionlocation not on record | 7 |
| Burlington, US | 7 |
| Champaign, US | 6 |
| UnBlocation not on record | 6 |
| Tallinn, EE | 6 |
| Universidade de Lisboa, Museu Bocagelocation not on record | 6 |
| Frauenfeld, CH | 5 |
| Adelaide, AU | 5 |
| Ural Federal University "B. N. Yeltsin"location not on record | 5 |
| MAlocation not on record | 5 |
| CJBGlocation not on record | 4 |
| Oregon State Universitylocation not on record | 4 |
| DOI/NPS, Little Rock Central High School National Historic Sitelocation not on record | 4 |
| Logan, US | 4 |
| Santa Barbara, US | 4 |
| Albuquerque, US | 4 |
| AUAlocation not on record | 3 |
| Toronto, CA | 3 |
| Universidad Nacional de Colombia (UNAL)location not on record | 3 |
| Pocatello, US | 3 |
| Herb. Ramboldlocation not on record | 3 |
| EL PASO, US | 3 |
| National Museum of Natural Sciencelocation not on record | 3 |
| Université de Montréal Biodiversity Centrelocation not on record | 3 |
| Institut und Museum fuer Geologie und Palaeontologielocation not on record | 3 |
| Chapel Hill, US | 3 |
| US | 3 |
| San Sebastián, ES | 2 |
| Brisbane, AU | 2 |
| M-Lichenslocation not on record | 2 |
| SIBA_UMAGlocation not on record | 2 |
| Servico de Microbiologia e Imunologialocation not on record | 2 |
| Portland, US | 2 |
| Porvoo, FI | 2 |
| Acadia Universitylocation not on record | 1 |
| Gijón, ES | 1 |
| Tilburg, NL | 1 |
| Edinburgh, GB | 1 |
| John T. Waterhouse Herbariumlocation not on record | 1 |
| Pullman, US | 1 |
| Lincoln, US | 1 |
| Saint Petersburg Universitylocation not on record | 1 |
| Davis, US | 1 |
| ULBF-AGRlocation not on record | 1 |
| Weber State Universitylocation not on record | 1 |
| Museum of the Rockieslocation not on record | 1 |
| Yukon Universitylocation not on record | 1 |
| NYSlocation not on record | 1 |
| Otaru, JP | 1 |
| Chicago, US | 1 |
| Winterthur, CH | 1 |
| Mexico City, MX | 1 |
| Royal Botanic Gardens, Kewlocation not on record | 1 |
| Students On Ice Foundationlocation not on record | 1 |
| Universidad de La Salle (La Salle)location not on record | 1 |
| NSW Dept of Planning, Industry and Environmentlocation not on record | 1 |
| nbflocation not on record | 1 |
| Pretoria, ZA | 1 |
| DClocation not on record | 1 |
| Auckland, NZ | 1 |
| Oskarshamn, SE | 1 |
| Armidale, AU | 1 |
Where the DNA of Rhizocarpon geographicum was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.