Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
NarrativeWikipediaarticle
Traits & measurements1 literature sources1 traits
Occurrence & distributionGBIF731 records
DNA & barcodingNCBIsequences
Genome at a glanceGoaT · NCBI≈31 Mbp
01Narrative
Punctelia appalachensis, commonly known as the Appalachian speckled shield lichen, is a species of foliose lichen in the family Parmeliaceae. It is found in the eastern United States and eastern Canada. The lichen was first formally described in 1962 by lichenologist William Culberson as a species of Parmelia. He collected the type specimen growing on tree bark in West Virginia, Hildur Krog transferred it to the newly circumscribed genus Punctelia in 1982. The thallus of Punctelia appalachensis is shiny and greenish-gray (drier individuals are bluish-grey); the surface is covered with maculae (spots or blotches) and pseudocyphellae. The underside of the thallus is black, at least in the center, with pale brown edges. Its dark underside allows it to be readily distinguished from other morphologically similar species in its range, such as Punctelia rudecta or P. caseana. The lichen usually grows on the bark of trees, but is sometimes found growing on rock.
No narrative description available for this taxon yet.
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Punctelia appalachensis has left across the world's sequence archives.
At a glance
Marker genes1
GenBank sequences2
Countries1
The DNA barcodea real sequence read deposited for this species
Punctelia appalachensis isolate DNA 3520 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
Marker genes sequenced
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★ITS2
fungal barcode
06Genome at a glanceGoaT · NCBI
The complete instruction manualPunctelia appalachensis carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Genome size≈30 569 428 bp assembly estimate
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
BACTERIUM Carsonella ruddii0.00016 Gb
THIS GENOME Punctelia appalachensis0.03 Gb
FUNGUS0.04 Gb
INSECT0.25 Gb
HUMAN3.2 Gb
WHEAT17 Gb
FERN Tmesipteris160.45 Gb
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
Assembly levelScaffold
08Occurrence & distribution
Record type731 records
Wild obs. + sensor154
Museum / vouchered577
Range
Area of Occupancy AOO1 720 km²
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy44% within 1 km
≤100 m 50≤1 km 13≤10 km 6>10 km 73
142 georeferenced · 12 without coordinates
Open the mapobservation + sensor154
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy53% within 1 km
≤100 m 1≤1 km 23≤10 km 20>10 km 1
45 georeferenced · 532 without coordinates
Open the institutions mapphysical evidence577
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions19 of 31 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Bronx, US
323
DOI/NPS, Colonial National Historical Parklocation not on record
53
Durham, US
32
University of Stellenboschlocation not on record
22
Wuzhou, CN
19
Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record
14
ILLSlocation not on record
13
Madison, US
12
ASUlocation not on record
11
FLASlocation not on record
10
St. Paul, US
10
PHlocation not on record
9
LDlocation not on record
8
US
7
Bergen, NO
4
Stockholm, SE
3
New Brunswick, US
3
Boise, US
3
Chicago, US
2
Durham, US
2
Philadelphia, US
2
Oregon State Universitylocation not on record
2
Fort Worth, US
2
Uppsala, SE
2
Santa Barbara, US
2
Fort Hayslocation not on record
1
EL PASO, US
1
College Park, US
1
McWane Science Centerlocation not on record
1
Museo Achille Folettolocation not on record
1
Helsinki, FI
1
31 institutions · 576 of 577 vouchered records shown · 1 without an institution code