A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Pseudopeziza trifolii has left across the world's sequence archives.
At a glance
Marker genes1
GenBank sequences1
Countries1
The DNA barcodea real sequence read deposited for this species
Pseudopeziza trifolii strain f. sp. trifolii pratensis small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
Marker genes sequenced
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★ITS1
fungal barcode
06Genome at a glanceGoaT
The complete instruction manualPseudopeziza trifolii carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Genome size31 730 000 bp
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
BACTERIUM Carsonella ruddii0.00016 Gb
THIS GENOME Pseudopeziza trifolii0.03 Gb
FUNGUS0.04 Gb
INSECT0.25 Gb
HUMAN3.2 Gb
WHEAT17 Gb
FERN Tmesipteris160.45 Gb
08Occurrence & distribution
Record type1 206 records
Wild obs. + sensor553
Museum / vouchered623
Other30
Range
Area of Occupancy AOO3 432 km²
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy26% within 1 km
≤100 m 97≤1 km 39≤10 km 376>10 km 3
515 georeferenced · 38 without coordinates
Open the mapobservation + sensor553
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy39% within 1 km
≤100 m 4≤1 km 157≤10 km 196>10 km 58
415 georeferenced · 208 without coordinates
Open the institutions mapphysical evidence623
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions26 of 52 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Olocation not on record
145
Bernard Price Institute for Palaeontological Researchlocation not on record
109
DPIlocation not on record
48
Uppsala, SE
30
Görlitz, DE
24
Auckland, NZ
23
Catholic University of Pekinglocation not on record
23
Madison, US
20
Pullman, US
17
Chicago, US
16
Bronx, US
16
Tartu, EE
13
LDlocation not on record
10
ILLSlocation not on record
8
Champaign, US
8
WU-MYClocation not on record
6
Kew, GB
6
MeiseBGlocation not on record
6
Helsinki, FI
5
Uniwersytet Łódzkilocation not on record
4
Karlsruhe, DE
4
Vancouver, CA
4
Toronto, CA
4
McWane Science Centerlocation not on record
4
FLASlocation not on record
4
WTUlocation not on record
3
Copenhagen, DK
3
Brown Universitylocation not on record
3
Chapel Hill, US
2
PHlocation not on record
2
Zürich, CH
2
Museo Entomologico de Leonlocation not on record
2
Clemson, US
2
TROMlocation not on record
2
GZUlocation not on record
2
Stockholm, SE
2
Mlocation not on record
2
Museum Ludovicae Ulricae, Zoology Institute of the University of Uppsalalocation not on record
1
Leicester, GB
1
Nurata nature reservelocation not on record
1
Grupo Actinomicetales Merida Facultad de Medicinalocation not on record
1
University of the Basque Country (UPV/EHU)location not on record
1
UNINE:NEUlocation not on record
1
Gijón, ES
1
nsnflocation not on record
1
Parkville, AU
1
Logan, US
1
Université de Montréal Biodiversity Centrelocation not on record
1
Salzburg, AT
1
Tilburg, NL
1
Universidade de Lisboa, Museu Bocagelocation not on record
1
St. Paul, US
1
52 institutions · 599 of 623 vouchered records shown · 24 without an institution code
WikipediaWikimedia Foundation4 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility1 206 records↗
NCBIUS National Library of Medicinesequences↗
Open Tree of LifeOpenTreephylogeny backbone↗
GoaTGenomes on a Tree · Sangergenome ~0.03 Gbp↗
Catalogue of LifeCOLtaxonomy↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗