Prunus domestica
speciesAt a glance
Sources12 archives
Databases and archives Prunus domestica's data was compiled from.
GBIFGlobal Biodiversity Information Facility76 798 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI37 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics38 specimens↗
NCBIUS National Library of Medicinesequences↗
FooDBThe Metabolomics Innovation Centrecompounds↗
NPASSNat. Product Activity & Species Sourcecompounds↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
PloiDBPloidy Databasegenome & karyotype
Paleobiology DatabasePBDB consortiumfossil record↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Size & morphology24
Life cycle & reproduction15
Diet & foraging2
Habitat & environment14
Physiology & chemistry8
Other traits1
Compounds documented for Prunus domestica across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile5 classes
Documented compounds5 706 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| Sugars | 39,500 mg/100g | FooDB | |
| Sucrose | 39,500 mg/100 g | FooDB | |
| Elaidic acid | 28,044 mg/100g | FooDB | |
| D-Mannose | 25,460 mg/100g | FooDB |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Prunus domestica has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Prunus domestica carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 4841×GoaT · DTOL Flowering Plants Estimates Kew · GoaT · Kew Plant DNA C-values Database · CCDB · slov-fl +7
2n 166×CCDB · ipcn-api-dl · CCDB · book-indian_vol1 · CCDB · CromoCat 2015
2n 322×CCDB · CromoCat 2015
n 82×CCDB · ipcn-api-dl · CCDB · CromoCat 2015
hexaploid1×GoaT · Kew Plant DNA C-values Database
polyploid inferred1×PloiDB · genus-scale
Record type76 798 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions94 of 171 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Uniwersytet Wrocławskilocation not on record | 167 |
| Görlitz, DE | 140 |
| BIO-UNIPIlocation not on record | 131 |
| DBF-NHMDlocation not on record | 113 |
| Olocation not on record | 97 |
| Karlsruhe, DE | 84 |
| Adelaide, AU | 73 |
| KMNlocation not on record | 67 |
| LDlocation not on record | 63 |
| WTUlocation not on record | 55 |
| Urumqi, CN | 41 |
| Beijing, CN | 38 |
| Moscow State Universitylocation not on record | 37 |
| Oskarshamn, SE | 31 |
| SLU Artdatabankenlocation not on record | 25 |
| GBS RAN - Glavny Botanichesky Sad Rossijskoj Akademii Nauklocation not on record | 24 |
| Durango, MX | 23 |
| Yangling, CN | 23 |
| South Kensington, GB | 22 |
| Mlocation not on record | 21 |
| BClocation not on record | 20 |
| MeiseBGlocation not on record | 17 |
| Corvallis, US | 16 |
| BDBClocation not on record | 15 |
| Christchurch, NZ | 14 |
| AZE009location not on record | 14 |
| Helsinki, FI | 13 |
| MAlocation not on record | 12 |
| AZE015location not on record | 12 |
| Armidale, AU | 12 |
| Salzburg, AT | 12 |
| Ann Arbor, US | 12 |
| Auckland, NZ | 11 |
| BFLlocation not on record | 11 |
| Tula State Universitylocation not on record | 10 |
| Instytut Ochrony Przyrody Polskiej Akademii Nauklocation not on record | 10 |
| ESP007location not on record | 10 |
| Saint Louis, US | 10 |
| Portland, US | 10 |
| València, ES | 9 |
| Wlocation not on record | 9 |
| DOI/NPS, Little Rock Central High School National Historic Sitelocation not on record | 9 |
| Provincia di Livornolocation not on record | 9 |
| New Haven, US | 9 |
| Tlalnepantla, MX | 8 |
| Santa Barbara, US | 8 |
| Bronx, US | 8 |
| CICYTEXlocation not on record | 8 |
| Berlin, DE | 8 |
| Puebla, MX | 7 |
| Barcelona, ES | 7 |
| Museo Entomologico de Leonlocation not on record | 6 |
| San Francisco, US | 6 |
| Uppsala, SE | 6 |
| Moscow, US | 6 |
| Salamanca, ES | 5 |
| Tartu, EE | 5 |
| Universidad de Nariño (UdeNar)location not on record | 5 |
| Boise, US | 5 |
| Mount Annan, AU | 5 |
| Canadian Department of Agriculturelocation not on record | 5 |
| Bern, CH | 5 |
| Jyväskylä, FI | 5 |
| Bergen, NO | 5 |
| College of the Atlantic, Museumlocation not on record | 4 |
| Tokushima, JP | 4 |
| Vitoria, ES | 4 |
| BRNUlocation not on record | 4 |
| Uniwersytet Śląski w Katowicachlocation not on record | 4 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 4 |
| Adam Mickiewicz University in Poznańlocation not on record | 4 |
| Puerto Ayora, EC | 3 |
| Badajoz, ES | 3 |
| Córdoba, AR | 3 |
| Angwin, US | 3 |
| Rotorua, NZ | 3 |
| Voronezh State Universitylocation not on record | 3 |
| Québec, CA | 3 |
| Canberra, AU | 3 |
| Toronto, CA | 3 |
| Kuopio, FI | 3 |
| Institut und Museum fuer Geologie und Palaeontologielocation not on record | 3 |
| Montréal, CA | 3 |
| YUG047location not on record | 3 |
| UChlocation not on record | 3 |
| Vancouver, CA | 3 |
| University of New Hampshirelocation not on record | 3 |
| Tapachula, MX | 2 |
| Entomological Society of Latvialocation not on record | 2 |
| Wellington, NZ | 2 |
| National Museum Waleslocation not on record | 2 |
| Uniwersytet Marii Curie-Skłodowskiejlocation not on record | 2 |
| Uniwersytet Opolskilocation not on record | 2 |
| Uniwersytet Jagiellońskilocation not on record | 2 |
| Ernst-Moritz-Arndt-Universitat Greifswaldlocation not on record | 2 |
| Brasília, BR | 2 |
| Victoria, CA | 2 |
| Philadelphia, US | 2 |
| Servico de Microbiologia e Imunologialocation not on record | 2 |
| Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH)location not on record | 2 |
| Acadia Universitylocation not on record | 2 |
| La Paz, BO | 2 |
| Kew, GB | 2 |
| Salvador, BR | 2 |
| Laboratorio de Ictiologialocation not on record | 1 |
| Guatemala City, GT | 1 |
| Banyoles, ES | 1 |
| UERJlocation not on record | 1 |
| Chengdu, CN | 1 |
| Phyletisches Museum Jenalocation not on record | 1 |
| EL PASO, US | 1 |
| Linares, MX | 1 |
| Instituto de Investigaciones Biológicas, Universidad Veracruzana, Región Xalapalocation not on record | 1 |
| Frankfurt am Main | 1 |
| Université Lavallocation not on record | 1 |
| Nijmegen, NL | 1 |
| Oulu, FI | 1 |
| UoB-IBlocation not on record | 1 |
| Natural History Museum Rotterdamlocation not on record | 1 |
| Porrentruy, CH | 1 |
| Santa Cruz de la Sierra, BO | 1 |
| Pamplona, ES | 1 |
| 黔东南州民族医药研究所标本室location not on record | 1 |
| IANIGLAlocation not on record | 1 |
| Granada, ES | 1 |
| DOI/NPS, Colonial National Historical Parklocation not on record | 1 |
| Royal Alberta Museumlocation not on record | 1 |
| UNESClocation not on record | 1 |
| Universiti Sains Malaysialocation not on record | 1 |
| Xian, CN | 1 |
| Zürich, CH | 1 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 1 |
| Riverside, US | 1 |
| Post Graduate College Bannulocation not on record | 1 |
| Altos de Pipe, VE | 1 |
| CJBGlocation not on record | 1 |
| Podgorica, ME | 1 |
| Bourges, FR | 1 |
| Jaén, ES | 1 |
| Hamilton, US | 1 |
| ISAlocation not on record | 1 |
| Mexico City, MX | 1 |
| Criciúma, BR | 1 |
| University of Guelph, OAC Herbariumlocation not on record | 1 |
| Tampa, US | 1 |
| Cape Town, ZA | 1 |
| Istituto Agrario Castelnuovolocation not on record | 1 |
| Qarshi Botanical Gardenlocation not on record | 1 |
| *unvoucheredlocation not on record | 1 |
| Pretoria, ZA | 1 |
| GZUlocation not on record | 1 |
| UFBAlocation not on record | 1 |
| Gijón, ES | 1 |
| UIBlocation not on record | 1 |
| National Biodiversity Institute, Costa Ricalocation not on record | 1 |
| Museo naturalistico del Frignano Ferruccio Minghellilocation not on record | 1 |
| Chapingo, MX | 1 |
| Wuzhou, CN | 1 |
| Kingston, US | 1 |
| PUC-RSlocation not on record | 1 |
| Bend, US | 1 |
| Pocatello, US | 1 |
| Chiba, JP | 1 |
| Austin, US | 1 |
| Claremont, US | 1 |
| Academy of Sciences of the Republic of Uzbekistanlocation not on record | 1 |
| The Tula Region State Institution of Culture "Tula Museum Association"location not on record | 1 |
| Trondheim, NO | 1 |
| Santiago de Compostela, ES | 1 |
| Austin, US | 1 |
| Universidad de Caldas (UCaldas)location not on record | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Prunus domestica was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.