Odocoileus hemionus
(Rafinesque, 1817) · speciesAt a glance
Sources15 archives
Databases and archives Odocoileus hemionus's data was compiled from.
WikipediaWikimedia Foundation18 languages↗
Animal Diversity WebUniv. of Michigan MZspecies account↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility69 247 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI6 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics24 specimens↗
LOTUSNatural Products (Wikidata)compounds↗
NPASSNat. Product Activity & Species Sourcecompounds↗
Open Tree of LifeOpenTreephylogeny backbone↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
NCBIUS National Library of Medicinegenome & karyotype↗
Tree of SexTree of Sex Consortiumgenome & karyotype↗
Paleobiology DatabasePBDB consortiumfossil record↗
WikidataWikimedia Foundationstructured facts↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Two forms of black-tailed deer or blacktail deer that occupy coastal woodlands in the Pacific Northwest of North America are subspecies of the mule deer (Odocoileus hemionus). They have sometimes been treated as a species, but virtually all recent authorities maintain they are subspecies.Novak, R. M. (1999). Walker's Mammals of the World. 6th edition.Heffelfinger, J. (version 2 March 2011). Tails with a dark side: The truth about whitetail – mule deer hybrids. Reid, F. A. (2006). Mammals of North America. 4th edition.Geist, V. (1998). Deer of the world: their evolution, behaviour, and ecology.Feldhamer, G. A., B. C. Thompson, and J. A. Chapman, editors (2003). Wild mammals of North America: biology, management, and conservation. 2nd edition. The Columbian black-tailed deer (O. h. columbianus) is found in western North America, from Northern California into the Pacific Northwest of the United States and coastal British Columbia in Canada.B.C. Ministry of Env., Lands & Parks. (Undated) Mule and black-tailed deer in British Columbia. The Sitka deer (O. h. sitkensis) is found coastally in British Columbia, southeast Alaska, and southcentral Alaska (as far as Kodiak Island).B.C. Ministry of Forests. 1996–1998. Coastal Black-Tailed Deer Study, linking to five reports.MacDonald, S. and Cook, J. (2007) Mammals and Amphibians of Southeast Alaska.Wildlife. U.S. Fish & Wildlife Service. Kodiak National Wildlife Refuge. Last updated: April 6, 2011.
No narrative description available for this taxon yet.
Size & morphology4
Life cycle & reproduction10
Diet & foraging4
Habitat & environment2
Physiology & chemistry3
Other traits5
Compounds documented for Odocoileus hemionus across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile5 classes
Documented compounds16 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| (1aS,4aR,7S,7aR,7bR)-1,1,7-trimethyl-4-methylidene-2,3,4a,5,6,7,7a,7b-octahydro-1aH-cyclopropa[e]azulene | present | NPASS | |
| (1S,3aR,5aS,5bR,7aR,9S,11aR,11bR,13bS)-3a,5a,5b,8,8,11a-hexamethyl-1-propan-2-yl-1,2,3,4,5,6,7,7a,9,10,11,11b,12,13b-tetradecahydrocyclopenta[a]chrysen-9-ol | present | NPASS | |
| (R)-Isosakuranetin | present | NPASS | |
| (R)-naringenin | present | NPASS | |
| 3E-Tridecen-2-one | present | LOTUS | |
| [(3aR,4R,5E,8R,9E,11aS)-4-acetyloxy-6,10-dimethyl-3-methylidene-2-oxo-3a,4,7,8,11,11a-hexahydrocyclodeca[b]furan-8-yl] acetate | present | NPASS | |
| [(3aR,4R,6E,8S,10E,11aR)-4-hydroxy-6,10-dimethyl-3-methylidene-2-oxo-3a,4,5,8,9,11a-hexahydrocyclodeca[b]furan-8-yl] acetate | present | NPASS | |
| Copaene | present | NPASS | |
| Fats And Glyceridic Oils Impurity 30 | present | NPASS | |
| Humulene | present | NPASS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Odocoileus hemionus has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
Besides the big genome in the nucleus, cells carry a small, circular loop of DNA inside the cell's energy factories — the mitochondria. It is inherited almost only from the mother and is a leftover from ancient bacteria that moved into the cell. The mitochondrial markers above (ND*, COX, CYTB…) are read from exactly this loop. Outer ring = one strand, inner ring = the other.
The complete instruction manual Odocoileus hemionus carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 704×GoaT · Animal Chromosome Counts Database · GoaT · Tree of Sex Database · TreeOfSex · vert
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Odocoileus hemionus. Above itBeside it, the bars count how many dated finds fall in each slice of time; the tallest bar is labelled, and heights use a square-root scale so that thin slices stay visible next to rich ones. Read this as how well each stretch of time is preserved and studied — thick bars mean plenty of the right kind of rock and plenty of collectors, which is related to, but not the same as, how common it actually was. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
The two clocks disagree here. The fossil record reaches back to 2.58 Ma, but the molecular clock dates the lineage to only 1.82 Ma — about 0.76 Myr younger. A fossil cannot be older than the lineage it belongs to, so one of the two is off: either the fossil is assigned to the wrong species, or the clock is running fast.
How it livedPBDB
Record type69 268 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions32 of 53 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Edmonton, CA | 150 |
| München, DE | 118 |
| Seattle, US | 89 |
| EL PASO, US | 84 |
| Zacatecas, MX | 81 |
| Tacoma, US | 70 |
| CASlocation not on record | 35 |
| University of Wyoming Museum of Vertebrateslocation not on record | 30 |
| Provo, US | 29 |
| Washington State University, Charles R. Conner Museumlocation not on record | 29 |
| Chicago, US | 28 |
| Wuzhou, CN | 22 |
| Berkeley, US | 20 |
| San Diego, US | 19 |
| Lubbock, US | 18 |
| Los Angeles, US | 18 |
| Denver, US | 17 |
| Cambridge, US | 15 |
| Philip L. Wright Zoological Museumlocation not on record | 15 |
| Washington, US | 14 |
| ASNHClocation not on record | 13 |
| ASUlocation not on record | 13 |
| University of Victorialocation not on record | 12 |
| Sam Noble Oklahoma Museum of Natural Historylocation not on record | 12 |
| Ann Arbor, US | 10 |
| Mexico City, MX | 10 |
| East Lansing, US | 10 |
| New Haven, US | 9 |
| Fort Hays State University, Sternberg Museumlocation not on record | 9 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 7 |
| Saint John, CA | 7 |
| Texas Cooperative Wildlife Collectionlocation not on record | 7 |
| Royal Saskatchewan Museumlocation not on record | 6 |
| Stockholm, SE | 5 |
| Bonn, DE | 5 |
| Louisiana State University, Museum of Zoologylocation not on record | 3 |
| 3 | |
| Natural History Museum of Utahlocation not on record | 2 |
| La Paz, MX | 2 |
| University of California Los Angeleslocation not on record | 2 |
| Helsinki, FI | 2 |
| San Francisco, US | 1 |
| Iowa City, US | 1 |
| North Carolina Museum of Natural Scienceslocation not on record | 1 |
| Universidad Nacional de Colombia (UNAL)location not on record | 1 |
| Albany, US | 1 |
| Rocky Mountain Biological Laboratorylocation not on record | 1 |
| Toronto, CA | 1 |
| Santa Cruz, US | 1 |
| Abilene Christian University Natural History Collectionlocation not on record | 1 |
| Science Museum of Minnesotalocation not on record | 1 |
| University of Nevada, Museum of Biologylocation not on record | 1 |
| Mexico City, MX | 1 |
Where the DNA of Odocoileus hemionus was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.