Ochotona princeps
(Richardson, 1828) · speciesAt a glance
Sources13 archives
Databases and archives Ochotona princeps's data was compiled from.
WikipediaWikimedia Foundation14 languages↗
Animal Diversity WebUniv. of Michigan MZspecies account↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility11 678 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI102 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics115 specimens↗
Open Tree of LifeOpenTreephylogeny backbone↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
NCBIUS National Library of Medicinegenome & karyotype↗
Tree of SexTree of Sex Consortiumgenome & karyotype↗
Paleobiology DatabasePBDB consortiumfossil record↗
WikidataWikimedia Foundationstructured facts↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
American pika carrying forget-me-not flowers and grass to build its nest in Cawridge, Alberta, Canada The American pika (Ochotona princeps), a diurnal species of pika, is found in the mountains of western North America, usually in boulder fields at or above the tree line. They are herbivorous, smaller relatives of rabbits and hares. Pikas have two different ways of foraging; they either directly consume food or they cache food in piles for the winter (haying). Pikas are vocal, using both calls and songs to warn when predators are nearby and during the breeding season. Predators of the pika include eagles, hawks, coyotes, bobcats, foxes, and weasels. Recent studies suggest some populations are declining due to habitat loss and global warming. They generally cannot tolerate temperatures above 25.5 °C. Currently the American pika is considered a species of least concern.
No narrative description available for this taxon yet.
Size & morphology3
Life cycle & reproduction9
Diet & foraging3
Habitat & environment2
Physiology & chemistry4
Other traits5
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Ochotona princeps has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
Besides the big genome in the nucleus, cells carry a small, circular loop of DNA inside the cell's energy factories — the mitochondria. It is inherited almost only from the mother and is a leftover from ancient bacteria that moved into the cell. The mitochondrial markers above (ND*, COX, CYTB…) are read from exactly this loop. Outer ring = one strand, inner ring = the other.
The complete instruction manual Ochotona princeps carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 684×GoaT · Animal Chromosome Counts Database · GoaT · Tree of Sex Database · TreeOfSex · vert
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Ochotona princeps. Above itBeside it, each dot is one dated fossil find — few enough to count, so they are drawn individually rather than as a graph. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil. Where the DNA reaches further back than the oldest fossil, the gap is hatched: the ghost lineage. It means the lineage was already out there, but has left us nothing we have dug up yet.
How it livedPBDB
Record type11 689 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions19 of 47 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| New Mexico Museum of Natural History and Sciencelocation not on record | 931 |
| Berkeley, US | 592 |
| München, DE | 451 |
| Ithaca, US | 419 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 178 |
| Seattle, US | 141 |
| Philip L. Wright Zoological Museumlocation not on record | 133 |
| Washington State University, Charles R. Conner Museumlocation not on record | 98 |
| Provo, US | 87 |
| Toronto, CA | 65 |
| Tacoma, US | 59 |
| Cambridge, US | 45 |
| NMUlocation not on record | 42 |
| San Diego, US | 42 |
| Los Angeles, US | 42 |
| Universidad Católica de Manizaleslocation not on record | 34 |
| Chicago, US | 33 |
| Edmonton, CA | 23 |
| Fort Hays State University, Sternberg Museumlocation not on record | 21 |
| University of Wyoming Museum of Vertebrateslocation not on record | 21 |
| University of Nevada, Museum of Biologylocation not on record | 16 |
| CASlocation not on record | 15 |
| Louisiana State University, Museum of Zoologylocation not on record | 13 |
| Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record | 11 |
| California State University, Long Beachlocation not on record | 10 |
| Texas Cooperative Wildlife Collectionlocation not on record | 8 |
| Lubbock, US | 7 |
| Sam Noble Oklahoma Museum of Natural Historylocation not on record | 6 |
| Ohio State University - Mammal Division, Columbus, OH (OSUM)location not on record | 6 |
| Denver, US | 5 |
| Zacatecas, MX | 5 |
| ASNHClocation not on record | 4 |
| Chicago, US | 4 |
| Rocky Mountain Biological Laboratorylocation not on record | 3 |
| North Carolina Museum of Natural Scienceslocation not on record | 3 |
| ASUlocation not on record | 3 |
| University of Alberta Museumslocation not on record | 3 |
| EL PASO, US | 2 |
| Mongolian Museum of Natural Historylocation not on record | 2 |
| Bonn, DE | 2 |
| University of Wisconsin, Zoological Museumlocation not on record | 2 |
| University of Wisconsin-Stevens Pointlocation not on record | 1 |
| Moore Laboratory of Zoology, Occidental Collegelocation not on record | 1 |
| Natural History Museum of Utahlocation not on record | 1 |
| Indiana State Universitylocation not on record | 1 |
| Central Michigan University Museum of Cultural and Natural Historylocation not on record | 1 |
| Truckee, US | 1 |
Where the DNA of Ochotona princeps was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.