Nectria cinnabarina
(Tode) Fr. · speciesAt a glance
Sources13 archives
Databases and archives Nectria cinnabarina's data was compiled from.
WikipediaWikimedia Foundation7 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility33 052 records↗
OBISOcean Biodiversity Information System2 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI36 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics16 specimens↗
NCBIUS National Library of Medicinesequences↗
LOTUSNatural Products (Wikidata)compounds↗
NPASSNat. Product Activity & Species Sourcecompounds↗
Open Tree of LifeOpenTreephylogeny backbone↗
GoaTGenomes on a Tree · Sangergenome ~0.02 Gbp↗
Catalogue of LifeCOLtaxonomy↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Nectria cinnabarina, also known as coral spot, is a plant pathogen that causes cankers on broadleaf trees. This disease is polycyclic and infects trees in the cool temperate regions of the Northern Hemisphere. N. cinnabarina is typically saprophytic, but will act as a weak parasite if presented with an opportunity via wounds in the tree or other stressors that weaken the tree’s defense to the disease. A study published in 2011 showed that this complex consists of at least 4 distinct species. There are only a few ways to manage this disease with techniques such as sanitation and pruning away branches that have the cankers. N. cinnabarina is not as significant a problem as other Nectria spp., some of which are the most important pathogens to infect hardwood trees.
No narrative description available for this taxon yet.
No structured trait data for this taxon yet.
Compounds documented for Nectria cinnabarina across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile3 classes
Documented compounds7 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| (1R,2S,4aS,8aS)-5,5-bis(hydroxymethyl)-8a-methyl-1-[2-(5-oxo-2H-furan-4-yl)ethyl]-1,2,3,4,4a,6,7,8-octahydronaphthalene-2-carbaldehyde | present | NPASS | |
| 4-[2-[(1R,4aS,8aS)-5,5-bis(hydroxymethyl)-8a-methyl-2-methylidene-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl]ethyl]-2H-furan-5-one | present | NPASS | |
| Echioidinin | present | NPASS | |
| Methyl 2,6,10,15,19-pentamethyl-21-(2,6,6-trimethylcyclohexen-1-yl)henicosa-2,4,6,8,10,12,14,16,18,20-decaenoate | present | LOTUS | |
| Neurosporaxanthin methyl ester | present | LOTUS | |
| Wightin | present | NPASS | |
| Wightionolide | present | NPASS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Nectria cinnabarina has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Nectria cinnabarina carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard periods (Jurassic, Cretaceous…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. The dashed rules marked ✦ are the five great mass extinctions. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
Record type33 054 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions56 of 116 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Bernard Price Institute for Palaeontological Researchlocation not on record | 599 |
| Olocation not on record | 321 |
| Uppsala, SE | 281 |
| Helsinki, FI | 139 |
| Bronx, US | 134 |
| Catholic University of Pekinglocation not on record | 104 |
| LDlocation not on record | 60 |
| Tartu, EE | 56 |
| Karlsruhe, DE | 54 |
| Chicago, US | 51 |
| SLU Artdatabankenlocation not on record | 42 |
| Görlitz, DE | 37 |
| Pullman, US | 35 |
| Vitoria, ES | 31 |
| Madison, US | 30 |
| Uniwersytet Łódzkilocation not on record | 29 |
| Lincoln, US | 29 |
| Adam Mickiewicz University in Poznańlocation not on record | 28 |
| Kuopio, FI | 27 |
| Auckland, NZ | 26 |
| Grupo Actinomicetales Merida Facultad de Medicinalocation not on record | 24 |
| TROMlocation not on record | 22 |
| PHlocation not on record | 21 |
| Zürich, CH | 18 |
| Joensuu, FI | 18 |
| FLASlocation not on record | 18 |
| ILLSlocation not on record | 18 |
| DPIlocation not on record | 18 |
| Museo Entomologico de Leonlocation not on record | 18 |
| WU-MYClocation not on record | 16 |
| Université de Montréal Biodiversity Centrelocation not on record | 16 |
| MeiseBGlocation not on record | 14 |
| GJOlocation not on record | 14 |
| Trondheim, NO | 13 |
| Cincinnati, US | 13 |
| Vancouver, CA | 13 |
| Champaign, US | 11 |
| MAlocation not on record | 11 |
| Philadelphia, US | 10 |
| Museo civico di Storia naturale Giacomo Doria di Genova | Giacomo Doria Natural History Museum in Genoalocation not on record | 9 |
| Senckenberg Gesellschaft für Naturforschung: Senckenberg Forschungsinstitut und Naturmuseumlocation not on record | 9 |
| TENN-Flocation not on record | 9 |
| Durango, MX | 9 |
| Brown Universitylocation not on record | 9 |
| FAMCALlocation not on record | 8 |
| Ann Arbor, US | 8 |
| Norwegian Institute of Bioeconomy Researchlocation not on record | 7 |
| Clemson, US | 7 |
| San Sebastián, ES | 7 |
| Kew, GB | 7 |
| WTUlocation not on record | 6 |
| 6 | |
| IFR-DNFlocation not on record | 5 |
| Slovenian Forestry Institutelocation not on record | 5 |
| Universidade de Lisboa, Museu Bocagelocation not on record | 5 |
| Entomological Society of Latvialocation not on record | 5 |
| BDBClocation not on record | 4 |
| Oskarshamn, SE | 4 |
| McWane Science Centerlocation not on record | 4 |
| Museum Ludovicae Ulricae, Zoology Institute of the University of Uppsalalocation not on record | 3 |
| Salzburg, AT | 3 |
| CA | 3 |
| Toronto, CA | 3 |
| Mexico City, MX | 3 |
| Oulu, FI | 3 |
| St. Paul, US | 3 |
| Staten Island, US | 3 |
| TFC Miclocation not on record | 3 |
| Mlocation not on record | 3 |
| Baton Rouge, US | 3 |
| Göteborg, SE | 2 |
| V. N. Karazin National Universitylocation not on record | 2 |
| National Biodiversity Institute, Costa Ricalocation not on record | 2 |
| European Distributed Institute of Taxonomy (EDIT)location not on record | 2 |
| Córdoba, ES | 2 |
| nsnflocation not on record | 2 |
| University of Tennessee at Chattanoogalocation not on record | 2 |
| Umeå Universitylocation not on record | 2 |
| Stockholm, SE | 2 |
| QVMAGlocation not on record | 2 |
| Canberra, AU | 2 |
| Bardejov, SK | 2 |
| Parkville, AU | 2 |
| Acadia Universitylocation not on record | 1 |
| University of the Philippines Los Baños Museum of Natural Historylocation not on record | 1 |
| Sede di Via Giorgio La Pira del Museo di Storia naturale di Firenze | Via Giorgio La Pira headquarter of the Natural History Museum in Florencelocation not on record | 1 |
| Natural History Museum Rotterdamlocation not on record | 1 |
| PRClocation not on record | 1 |
| GZUlocation not on record | 1 |
| Laramie, US | 1 |
| Fungario QCAM de la Pontificia Universidad Católica del Ecuadorlocation not on record | 1 |
| CABI Bioscience Genetic Resource Collectionlocation not on record | 1 |
| NAlocation not on record | 1 |
| Copenhagen, DK | 1 |
| Zapopan, MX | 1 |
| Bando, JP | 1 |
| Winterthur, CH | 1 |
| BClocation not on record | 1 |
| Uniwersytet Wrocławskilocation not on record | 1 |
| Odawara, JP | 1 |
| Mérida, ES | 1 |
| HabitatVisionlocation not on record | 1 |
| Tomioka, JP | 1 |
| National Institute of Biological Resourceslocation not on record | 1 |
| Blacksburg, US | 1 |
| Bourges, FR | 1 |
| JA-CAGPDS-CAMlocation not on record | 1 |
| Gijón, ES | 1 |
| Berlin, DE | 1 |
| University of Warsawlocation not on record | 1 |
| Denver, US | 1 |
| Hobart, AU | 1 |
| University of Oslo, Natural History Museumlocation not on record | 1 |
| Museo de La Platalocation not on record | 1 |
| DASSHlocation not on record | 1 |
| Jyväskylä, FI | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Nectria cinnabarina was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.