Manihot esculenta
Crantz · speciesAt a glance
Sources17 archives
Databases and archives Manihot esculenta's data was compiled from.
WikipediaWikimedia Foundation22 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility36 853 records↗
OBISOcean Biodiversity Information System23 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI19 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics28 specimens↗
NCBIUS National Library of Medicinesequences↗
dukesphytochemcompounds
FooDBThe Metabolomics Innovation Centrecompounds↗
LOTUSNatural Products (Wikidata)compounds↗
NPASSNat. Product Activity & Species Sourcecompounds↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
PloiDBPloidy Databasegenome & karyotype
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Manihot esculenta, commonly called cassava (), manioc, or yuca (among numerous regional names), is a woody shrub of the spurge family, Euphorbiaceae, native to South America. Although a perennial plant, cassava is extensively cultivated as an annual crop in tropical and subtropical regions for its edible starchy tuberous root, a major source of carbohydrates. Though it is often called yuca in parts of Spanish America and in the United States, it is not related to yucca, a shrub in the family Asparagaceae. Cassava is predominantly consumed in boiled form, but substantial quantities are used to extract cassava starch, called tapioca, which is used for food, animal feed, and industrial purposes. The Brazilian farinha, and the related garri of West Africa, is an edible coarse flour obtained by grating cassava roots, pressing moisture off the obtained grated pulp, and finally drying it (and roasting both in the case of farinha and garri). Cassava is the third-largest source of food carbohydrates in the tropics, after rice and maize. Cassava is a major staple food in the developing world, providing a basic diet for over half a billion people. It is one of the most drought-tolerant crops, capable of growing on marginal soils. Nigeria is the world's largest producer of cassava, while Thailand is the largest exporter of cassava starch. Cassava is classified as either sweet or bitter. Like other roots and tubers, both bitter and sweet varieties of cassava contain antinutritional factors and toxins, with the bitter varieties containing much larger amounts. It must be properly prepared before consumption, as improper preparation of cassava can leave enough residual cyanide to cause acute cyanide intoxication, goiters, and even ataxia, partial paralysis, or death. The more toxic varieties of cassava are a fall-back resource (a "food security crop") in times of famine or food insecurity in some places. Farmers often prefer the bitter varieties because they deter pests, animals, and thieves.
No narrative description available for this taxon yet.
Size & morphology21
Life cycle & reproduction27
Diet & foraging1
Habitat & environment30
Physiology & chemistry23
Uses & economy12
Other traits6
Compounds documented for Manihot esculenta across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile5 classes
Documented compounds5 757 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| CARBOHYDRATES | 854,875 ppm | DukesPhytochem | |
| STARCH | 828,400 ppm | DukesPhytochem | |
| WATER | 810,000 ppm | DukesPhytochem | |
| PROTEIN | 300,000 ppm | DukesPhytochem | |
| ASH | 135,000 ppm | DukesPhytochem | |
| FIBER | 88,600 ppm | DukesPhytochem | |
| α-D-galactose | 55,420 mg/100g | FooDB |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Manihot esculenta has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Manihot esculenta carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 3623×GoaT · Kew Plant DNA C-values Database · CCDB · ipcn-api-dl · CCDB · book-indian_vol1 +5
2n 301×CCDB · ipcn-api-dl
2n 341×CCDB · book-indian_vol1
2n 381×CCDB · book-indian_vol1
2n 541×CCDB · ipcn-api-dl
n 187×CCDB · ipcn-api-dl · CCDB · book-ipcn67-71 · CCDB · book-ipcn73-74
diploid1×GoaT · Kew Plant DNA C-values Database
diploid inferred1×PloiDB · genus-scale
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
Record type36 876 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions124 of 245 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Bronx, US | 404 |
| Saint Louis, US | 286 |
| Instituto Amazónico de Investigaciones Científicas - SINCHIlocation not on record | 280 |
| Chicago, US | 225 |
| Durango, MX | 66 |
| Universidad Nacional de Colombia (UNAL)location not on record | 58 |
| Cenargenlocation not on record | 56 |
| Brasília, BR | 51 |
| University of Stellenboschlocation not on record | 47 |
| Kew, GB | 42 |
| Universidade Federal de Goiáslocation not on record | 37 |
| Tapachula, MX | 36 |
| Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH)location not on record | 34 |
| Beijing, CN | 32 |
| Istituto Agrario Castelnuovolocation not on record | 31 |
| Brisbane, AU | 25 |
| Guilin, CN | 25 |
| Mexico City, MX | 24 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 22 |
| Université de Strasbourglocation not on record | 19 |
| Puerto Ayora, EC | 18 |
| Laboratorio de Ictiologialocation not on record | 18 |
| UNEMATlocation not on record | 18 |
| Kunming, CN | 17 |
| Guangzhou, CN | 17 |
| JBRJlocation not on record | 16 |
| Chapingo, MX | 16 |
| Montecillo, Texcoco, MX | 15 |
| Honolulu, US | 14 |
| Durban, ZA | 14 |
| MeiseBGlocation not on record | 13 |
| Pretoria, ZA | 13 |
| South Kensington, GB | 13 |
| Museum of Zoologylocation not on record | 12 |
| FJIDClocation not on record | 12 |
| Davis, US | 12 |
| Pontificia Universidad Javeriana (PUJ)location not on record | 12 |
| Fort Worth, US | 12 |
| Universidad de Antioquia (UdeA)location not on record | 11 |
| Mérida, MX | 11 |
| Juriquilla, MX | 11 |
| Xiamen, CN | 11 |
| National Biodiversity Institute, Costa Ricalocation not on record | 11 |
| Miami, US | 10 |
| Auckland, NZ | 10 |
| Smithfield, AU | 10 |
| Aarhus, DK | 10 |
| QCNElocation not on record | 10 |
| Madison, US | 10 |
| Antiguo Cuscatlán, SV | 9 |
| Université du Lomélocation not on record | 9 |
| MAlocation not on record | 9 |
| UEPAlocation not on record | 9 |
| Yaoundé, CM | 9 |
| Yunnan Universitylocation not on record | 8 |
| Canberra, AU | 8 |
| Museu Paraense Emílio Goeldilocation not on record | 8 |
| Chaguaramas, TT | 8 |
| UnBlocation not on record | 8 |
| Tampa, US | 8 |
| Herbario MAT de la Universidad Politécnica Estatal del Carchilocation not on record | 8 |
| Jena Microbial Resource Collectionlocation not on record | 7 |
| Austin, US | 7 |
| UESBlocation not on record | 7 |
| Ivano-Frankivsk, UA | 7 |
| San Francisco de Campeche, MX | 7 |
| Paris, FR | 7 |
| BISHlocation not on record | 7 |
| Baroda, IN | 7 |
| Instituto Nacional de Pesquisas da Amazônia (INPA)location not on record | 7 |
| Canadian Department of Agriculturelocation not on record | 6 |
| St. Augustine, TT | 6 |
| Central China Normal Universitylocation not on record | 6 |
| ESALQlocation not on record | 6 |
| Universidad Católica de Oriente (UCO)location not on record | 6 |
| Porto Velho, BR | 6 |
| Santa Cruz de la Sierra, BO | 6 |
| Philadelphia, US | 6 |
| Mérida, MX | 6 |
| Berlin, DE | 6 |
| Universidade Federal do Rio Grande do Nortelocation not on record | 6 |
| Xishuangbanna Tropical Botanical Garden, Academia Sinicalocation not on record | 5 |
| Chongqing Museumlocation not on record | 5 |
| La Paz, BO | 5 |
| Durham, US | 5 |
| arosemena tola, EC | 5 |
| IPA/SPlocation not on record | 5 |
| Instituto do Meio Ambientelocation not on record | 5 |
| UFPIlocation not on record | 5 |
| Universidad de Caldas (UCaldas)location not on record | 5 |
| TAIElocation not on record | 5 |
| Feira de Santana, BR | 5 |
| ASUlocation not on record | 4 |
| Riobamba, EC | 4 |
| Loja, EC | 4 |
| Beijing, CN | 4 |
| UFRPElocation not on record | 4 |
| Taipei, TW | 4 |
| BMlocation not on record | 4 |
| Brussels, BE | 4 |
| CASlocation not on record | 4 |
| Brasília, BR | 4 |
| HNBlocation not on record | 4 |
| UFOPlocation not on record | 4 |
| UFBAlocation not on record | 4 |
| Centro de Estudios y Colecciones Biológicas para la Conservaciónlocation not on record | 3 |
| Museo Entomologico de Leonlocation not on record | 3 |
| Leiden University Medical Centerlocation not on record | 3 |
| Altos de Pipe, VE | 3 |
| HUAlocation not on record | 3 |
| Claremont, US | 3 |
| Universidade Federal do Maranhãolocation not on record | 3 |
| Instituto de Investigaciones Biológicas, Universidad Veracruzana, Región Xalapalocation not on record | 3 |
| Masindi, UG | 3 |
| USP-IBlocation not on record | 3 |
| UEMlocation not on record | 3 |
| Teresina, BR | 3 |
| Area de Conservacion Guanacastelocation not on record | 3 |
| Universiti Sains Malaysialocation not on record | 3 |
| Uppsala, SE | 3 |
| Chengdu, CN | 3 |
| Universidade do Estado de Mato Grossolocation not on record | 3 |
| Riverside, US | 3 |
| Kagoshima, JP | 3 |
| MEXUlocation not on record | 2 |
| Herbier National du Gabonlocation not on record | 2 |
| UTFPR-CPlocation not on record | 2 |
| Campo Mourão, BR | 2 |
| Palmerston, AU | 2 |
| Knoxville, US | 2 |
| Gump Stationlocation not on record | 2 |
| Guangzhou, CN | 2 |
| Zhejiang Universitylocation not on record | 2 |
| Giardini Botanici Hanburylocation not on record | 2 |
| Austin, US | 2 |
| Vancouver, CA | 2 |
| FUNEDlocation not on record | 2 |
| Cincinnati, US | 2 |
| Universidade Federal de Sergipe (UFS)location not on record | 2 |
| UFMGlocation not on record | 2 |
| Adelaide, AU | 2 |
| Nanjing, CN | 2 |
| Taipei, TW | 2 |
| Guatemala City, GT | 2 |
| Instituto de Ecología Aplicada, Universidad Autónoma de Tamaulipaslocation not on record | 2 |
| Cusco, PE | 2 |
| HUT Culture Collectionlocation not on record | 2 |
| Tsukuba, JP | 2 |
| Guiyang, CN | 2 |
| LBVlocation not on record | 2 |
| San José, CR | 2 |
| TAFORI-LSRClocation not on record | 2 |
| Quito, EC | 2 |
| TNMlocation not on record | 2 |
| Lima, PE | 2 |
| Santa Teresa, BR | 1 |
| Fortaleza, BR | 1 |
| Córdoba, AR | 1 |
| UNICAMPlocation not on record | 1 |
| Universidad Juárez Autónoma de Tabascolocation not on record | 1 |
| CEPLAClocation not on record | 1 |
| UFMSlocation not on record | 1 |
| Universidade Federal do Ceara, Departamento de Biologialocation not on record | 1 |
| University of Port Harcourtlocation not on record | 1 |
| Museu Nacional, Universidade Federal do Rio de Janeirolocation not on record | 1 |
| University of Hamburglocation not on record | 1 |
| Institut de Biologia Evolutiva, (CSIC-UPF)location not on record | 1 |
| Cochabamba, BO | 1 |
| University of North Carolina at Pembrokelocation not on record | 1 |
| Río Palenque Science Centerlocation not on record | 1 |
| Iquitos, PE | 1 |
| Mount Annan, AU | 1 |
| PORTlocation not on record | 1 |
| Universidad de la Amazonia (UniAmazonia)location not on record | 1 |
| EL PASO, US | 1 |
| Kensington, AU | 1 |
| Minister of Sustainable Development, Climate Change & Solid Waste Managementlocation not on record | 1 |
| GB | 1 |
| Jardín Botánico José Celestino Mutis (JBBJCM)location not on record | 1 |
| Hobart, AU | 1 |
| San Diego, US | 1 |
| James Cook Townsvillelocation not on record | 1 |
| Wellington, NZ | 1 |
| Seoul, KR | 1 |
| Wuhan, CN | 1 |
| Ojo, NG | 1 |
| Instituto de Investigação Científica Tropicallocation not on record | 1 |
| Denver, US | 1 |
| Plocation not on record | 1 |
| San Isidro, AR | 1 |
| Clemson, US | 1 |
| Autlán de Navarro, MX | 1 |
| Tuscaloosa, US | 1 |
| Wlocation not on record | 1 |
| Departamento de Geologia, Universidad de Chilelocation not on record | 1 |
| Wuzhou, CN | 1 |
| Nagano City, JP | 1 |
| Rivers State Universitylocation not on record | 1 |
| Guiyang, CN | 1 |
| Changsha, CN | 1 |
| UEMAlocation not on record | 1 |
| Gujarat Biodiversity Gene Banklocation not on record | 1 |
| QAPlocation not on record | 1 |
| Institut fur Allgemeine Mikrobiologielocation not on record | 1 |
| UFPRlocation not on record | 1 |
| Departamento de Sistematica e Ecologialocation not on record | 1 |
| Criciúma, BR | 1 |
| Burlington, US | 1 |
| Dresden, DE | 1 |
| Dekalb, US | 1 |
| Armidale, AU | 1 |
| Ann Arbor, US | 1 |
| National Herbarium of São Tomé and Principelocation not on record | 1 |
| XALlocation not on record | 1 |
| AUAlocation not on record | 1 |
| Chiba, JP | 1 |
| Jackson, US | 1 |
| UNISANTAlocation not on record | 1 |
| Centre National d'Application des Recherches Pharmaceutiques (CNARP)location not on record | 1 |
| Nnamdi Azikiwe University Herbarium (NAUH)location not on record | 1 |
| Corrientes, AR | 1 |
| Nishihara, JP | 1 |
| LDlocation not on record | 1 |
| UTPLlocation not on record | 1 |
| College Park, US | 1 |
| St. Paul, US | 1 |
| Angwin, US | 1 |
| CNF-UFHBlocation not on record | 1 |
| Hanshan Normal Universitylocation not on record | 1 |
| Mexico City, MX | 1 |
| OTSlocation not on record | 1 |
| Mexico City, MX | 1 |
| Stockholm, SE | 1 |
| Bogotá, D.C., CO | 1 |
| Shanghai, CN | 1 |
| Universidade Federale do Rio Grande do Sullocation not on record | 1 |
| URCAlocation not on record | 1 |
| PUC-RSlocation not on record | 1 |
| Museo naturalistico del Frignano Ferruccio Minghellilocation not on record | 1 |
| Centro de Pesquisas Agropecuarias do Tropico Umidolocation not on record | 1 |
| UFVJMlocation not on record | 1 |
| Montréal, CA | 1 |
| UNESP-RClocation not on record | 1 |
| Fundación Trópico Altolocation not on record | 1 |
| UNESClocation not on record | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Manihot esculenta was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.