Ilex opaca
Aiton · speciesAt a glance
Sources12 archives
Databases and archives Ilex opaca's data was compiled from.
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility38 126 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI38 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics21 specimens↗
NCBIUS National Library of Medicinesequences↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
PloiDBPloidy Databasegenome & karyotype
Paleobiology DatabasePBDB consortiumfossil record↗
WikidataWikimedia Foundationstructured facts↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Le houx américain est un petit arbre à feuilles persistantes appartenant au genre Ilex de la famille des Aquifoliacées, cultivé comme arbuste d'ornement.
No narrative description available for this taxon yet.
Size & morphology5
Life cycle & reproduction29
Habitat & environment24
Physiology & chemistry25
Uses & economy16
Other traits7
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Ilex opaca has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Ilex opaca carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 362×CCDB · book-fedorov · CCDB · book-atlas-flowering-plants
diploid inferred1×PloiDB · genus-scale
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Ilex opaca. Above itBeside it, each dot is one dated fossil find — few enough to count, so they are drawn individually rather than as a graph.
How it livedPBDB
Record type38 127 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions94 of 141 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Philadelphia, US | 202 |
| Bronx, US | 148 |
| Bangkok, TH | 90 |
| College Park, US | 75 |
| Williamsburg, US | 57 |
| Millersville, US | 48 |
| Jena Microbial Resource Collectionlocation not on record | 46 |
| Jackson, US | 46 |
| Chongqing Museumlocation not on record | 44 |
| Charleston Southern Universitylocation not on record | 41 |
| University of Stellenboschlocation not on record | 34 |
| Tuscaloosa, US | 33 |
| Chapel Hill, US | 32 |
| Miami, US | 32 |
| Norfolk, US | 28 |
| Mississippi State, US | 27 |
| Columbia, US | 26 |
| Valdosta State Universitylocation not on record | 24 |
| Appalachian State Universitylocation not on record | 24 |
| Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record | 24 |
| US | 23 |
| Fort Worth, US | 23 |
| Knoxville, US | 22 |
| Clemson, US | 20 |
| Richmond, US | 19 |
| University of Southern Mississippilocation not on record | 18 |
| Western Carolina Universitylocation not on record | 17 |
| China Agricultural Universitylocation not on record | 17 |
| DOI/NPS, Mississippi National River & Recreation Arealocation not on record | 17 |
| Dover, US | 16 |
| Bloomington, US | 15 |
| Saint Louis, US | 14 |
| Austin, US | 12 |
| Fredericksburg, US | 12 |
| Flagstaff, US | 11 |
| Burlington, US | 10 |
| AUAlocation not on record | 10 |
| Henderson State Universitylocation not on record | 9 |
| EL PASO, US | 9 |
| Ann Arbor, US | 9 |
| Philadelphia, US | 8 |
| Washington, US | 8 |
| University of New Hampshirelocation not on record | 8 |
| Tampa, US | 7 |
| Tall Timbers Research Stationlocation not on record | 7 |
| Staten Island, US | 6 |
| University of North Carolina at Pembrokelocation not on record | 6 |
| Dekalb, US | 6 |
| Lord Fairfax Community Collegelocation not on record | 6 |
| Riverside, US | 5 |
| Johnson City, US | 5 |
| FFPRIlocation not on record | 5 |
| GAlocation not on record | 5 |
| Angwin, US | 5 |
| James F. Matthews Center for Biodiversity Studieslocation not on record | 5 |
| University of Tennessee at Chattanoogalocation not on record | 4 |
| Chicago, US | 4 |
| DOI/NPS, Little Rock Central High School National Historic Sitelocation not on record | 4 |
| Santa Barbara, US | 4 |
| Baltimore, US | 4 |
| Davenport, US | 4 |
| Kingston, US | 4 |
| New Haven, US | 4 |
| Hudson, US | 4 |
| Tempe, US | 4 |
| Denver, US | 3 |
| Moscow, US | 3 |
| Fairfax, US | 3 |
| Auckland, NZ | 3 |
| GB | 3 |
| Denton, US | 3 |
| New Brunswick, US | 3 |
| Canadian Department of Agriculturelocation not on record | 3 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 3 |
| Conway, US | 3 |
| Kew, GB | 3 |
| Florida Museum of Natural Historylocation not on record | 2 |
| Provo, US | 2 |
| North Carolina Museum of Natural Scienceslocation not on record | 2 |
| Pondicherry, IN | 2 |
| Long Beach, US | 2 |
| Allentown, US | 2 |
| Minia, EG | 2 |
| Boise, US | 2 |
| McWane Science Centerlocation not on record | 2 |
| Northridge, US | 2 |
| WTUlocation not on record | 2 |
| Pullman, US | 2 |
| Wlocation not on record | 2 |
| Harrisonburg, US | 2 |
| US | 2 |
| Weymouth Woods Sandhills Nature Preservelocation not on record | 2 |
| Keene State Universitylocation not on record | 2 |
| Audubon Society -- Silver Bluff Audubon Center and Sanctuarylocation not on record | 2 |
| Asheville, US | 2 |
| Museum of the Rockieslocation not on record | 2 |
| Fayetteville, US | 2 |
| Emporia, US | 2 |
| Claremont, US | 2 |
| Macomb, US | 2 |
| Rotorua, NZ | 2 |
| Smithsonian Institutionlocation not on record | 2 |
| Beijing, CN | 2 |
| Tennessee Technological Universitylocation not on record | 2 |
| BAYLUlocation not on record | 1 |
| Smithfield, AU | 1 |
| Durango, MX | 1 |
| Musee des Dinosaures d'Esperaza (Aude)location not on record | 1 |
| Phoenix, US | 1 |
| Leiden University Medical Centerlocation not on record | 1 |
| Mexico City, MX | 1 |
| Volunteer State Community Collegelocation not on record | 1 |
| Taipei, TW | 1 |
| Uppsala, SE | 1 |
| Armidale, AU | 1 |
| Herbarium of South China Botanical Gardenlocation not on record | 1 |
| Pittsburg, US | 1 |
| Cambridge, US | 1 |
| Oswego, US | 1 |
| Conway, US | 1 |
| Oskarshamn, SE | 1 |
| Edmonton, CA | 1 |
| Durham, US | 1 |
| Moscow State Universitylocation not on record | 1 |
| Due West, US | 1 |
| Wellington, NZ | 1 |
| San Angelo, US | 1 |
| Little Rock, US | 1 |
| Cincinnati, US | 1 |
| Gijón, ES | 1 |
| Institut de Biologia Evolutiva, (CSIC-UPF)location not on record | 1 |
| Universidad de Nariño (UdeNar)location not on record | 1 |
| Tulane Universitylocation not on record | 1 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 1 |
| Stephenville, US | 1 |
| Universidad de Caldas (UCaldas)location not on record | 1 |
| Madison, US | 1 |
| Québec, CA | 1 |
| Durango, US | 1 |
| Adam Mickiewicz University in Poznańlocation not on record | 1 |
| Russellville, US | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Ilex opaca was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.