Hypopitys monotropa
Crantz · speciesAt a glance
Sources12 archives
Databases and archives Hypopitys monotropa's data was compiled from.
WikipediaWikimedia Foundation11 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility21 016 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI21 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics34 specimens↗
NCBIUS National Library of Medicinesequences↗
LOTUSNatural Products (Wikidata)compounds↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
PloiDBPloidy Databasegenome & karyotype
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Monotropa hypopitys, the so-called Dutchman's pipe, false beech-drops, pinesap, or yellow bird's-nest, is a herbaceous perennial plant, formerly classified in the families Monotropaceae or Pyrolaceae, but now included within the subfamily Monotropoideae of the family (Ericaceae). It is native to temperate regions of the Northern Hemisphere, and is scarce or rare in many areas. However, it is still the most widespread member of the subfamily. While currently included in the genus Monotropa, recent genetic evidence strongly suggests that Monotropa hypopitys should be placed in its own genus, Hypopitys, with the single species Hypopitys monotropa Crantz, but possibly containing several other species. The pink to cream flower, with four to five petals, is borne on a short stalk Monotropa hypopitys with bee Unlike most plants, it does not contain chlorophyll; it is a myco-heterotroph, getting its food through parasitism upon fungi rather than photosynthesis. These fungi form a mycorrhiza with nearby tree species. Plants are fleshy and grow 10–35 cm tall. True stems are nonexistent. Instead, the only part which emerges from the soil are unbranched adventitious inflorescences which are developmentally similar to adventitious roots. All parts of the plant are pale yellowish white to reddish-tinged. The bracts are 5–10 mm long scale-like structures, which cover most of the inflorescence. Plants flower from April to December depending on the geographic region (May to October in North America). The flowers are pendulous when young, but become erect when they begin to mature into the fruit which is a capsule. The flowers are 9–12 mm long and produced in a cluster of 1–11 together at the apex of the inflorescence, which is a raceme. It flowers between early summer and mid autumn; plants that flower in summer are yellow and sparsely hairy, while those that flower in autumn are red and densely hairy. These two color "forms" overlap in flowering time. It has been suggested that yellow individuals are largely self-pollinating. The species name is from Latinized Greek hypo-, "under", and pitys, "pine", referring to where pinesap often grows. However, Linnaeus misspelled it hypopithys. Many authorities have followed his spelling. On the other hand, it has been stated that the spelling "is generally treated as correctable to 'hypopitys'", as followed by other authorities. The variability of the species in colour, hairiness, and in the number of flowers, has led to an extensive synonymy for the species. The entire list is over 80 synonyms; some of which include Hypopitys americana, H. fimbriata, H. insignata, H. lanuginosa, H. latisquama, H. monotropa, Monotropa chinensis, M. hypophegea, M. lanuginosa, M. latisquama, M. multiflora and M. taiwaniana. In California, Monotropa hypopitys may be confused for the much less common Pityopus or Hemitomes which are superficially similar.
No narrative description available for this taxon yet.
Size & morphology18
Life cycle & reproduction13
Diet & foraging2
Habitat & environment11
Physiology & chemistry2
Other traits1
Compounds documented for Hypopitys monotropa across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile5 classes
Documented compounds19 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| (+)-Ursolic Acid | present | LOTUS | |
| alpha-Linolenic acid | present | LOTUS | |
| beta-Sitosterol | present | LOTUS | |
| Campesterol | present | LOTUS | |
| Chloromycorrhizin A | present | LOTUS | |
| Chloromycorrhizinol A | present | LOTUS | |
| Cholesterol | present | LOTUS | |
| Cycloartenol | present | LOTUS | |
| Cycloeucalenol | present | LOTUS | |
| Elaidolinolenic acid | present | LOTUS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Hypopitys monotropa has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Hypopitys monotropa carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 489×GoaT · DTOL Flowering Plants Estimates Kew · CCDB · slov-fl · CCDB · brit-fl +5
2n 166×GoaT · DTOL Flowering Plants Estimates Kew · CCDB · slov-fl · CCDB · nw-europe-fl +3
2n 321×CCDB · book-fedorov
n 242×CCDB · ipcn-api-dl
polyploid inferred1×PloiDB · family-scale
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
Record type21 016 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions65 of 121 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Uniwersytet Wrocławskilocation not on record | 1 555 |
| Moscow State Universitylocation not on record | 260 |
| SLU Artdatabankenlocation not on record | 70 |
| GJOlocation not on record | 60 |
| Ann Arbor, US | 59 |
| Burlington, US | 54 |
| Kuopio, FI | 46 |
| Salzburg, AT | 46 |
| Görlitz, DE | 30 |
| Bloomington, US | 29 |
| University of Stellenboschlocation not on record | 28 |
| Mlocation not on record | 24 |
| Frankfurt am Main | 23 |
| BFLlocation not on record | 22 |
| Montréal, CA | 22 |
| Porvoo, FI | 21 |
| Missoula, US | 18 |
| DOI/NPS, Colonial National Historical Parklocation not on record | 18 |
| Green Bay, US | 16 |
| Moscow, US | 15 |
| Wuhan, CN | 14 |
| WTUlocation not on record | 14 |
| Kagoshima, JP | 13 |
| Victoria, CA | 13 |
| Turku, FI | 11 |
| Oulu, FI | 11 |
| Chengdu, CN | 11 |
| Beijing, CN | 10 |
| IB FRC Komi SC UB RASlocation not on record | 10 |
| GBS RAN - Glavny Botanichesky Sad Rossijskoj Akademii Nauklocation not on record | 10 |
| Québec, CA | 9 |
| Brussel, BE | 8 |
| Forssa, FI | 7 |
| Sendai, JP | 7 |
| JP | 6 |
| Otaru, JP | 6 |
| Institute for Agricultural Bacteriology and Fermentation Biologylocation not on record | 5 |
| KIRMlocation not on record | 5 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 5 |
| Xining, CN | 5 |
| University of Trondheim, Museum of Natural History and Archeologylocation not on record | 5 |
| IWEP FEB RASlocation not on record | 4 |
| TUR-Alocation not on record | 4 |
| Toronto, CA | 4 |
| Fredericksburg, US | 3 |
| Guangzhou, CN | 3 |
| Bozeman, US | 3 |
| Mississippi State, US | 3 |
| Williamsburg, US | 3 |
| South Kensington, GB | 3 |
| Université Lavallocation not on record | 3 |
| Wlocation not on record | 3 |
| Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record | 3 |
| BRNUlocation not on record | 3 |
| Tula State Universitylocation not on record | 3 |
| No collectionlocation not on record | 3 |
| Dresden, DE | 3 |
| Lord Fairfax Community Collegelocation not on record | 3 |
| Tula State Lev Tolstoy Pedagogical Universitylocation not on record | 3 |
| Vancouver, CA | 3 |
| Madison, US | 3 |
| Provincia di Livornolocation not on record | 3 |
| Nagasaki University - Fisherieslocation not on record | 2 |
| National Museum Waleslocation not on record | 2 |
| Chicago, US | 2 |
| Berlin, DE | 2 |
| Acadia Universitylocation not on record | 2 |
| BSBIlocation not on record | 2 |
| GAlocation not on record | 2 |
| Bend, US | 2 |
| NTNU University Museum, Department of Natural Historylocation not on record | 2 |
| Tromso University Museumlocation not on record | 2 |
| Tuscaloosa, US | 2 |
| Bronx, US | 2 |
| AUAlocation not on record | 2 |
| Oswego, US | 2 |
| McWane Science Centerlocation not on record | 2 |
| Portland, US | 2 |
| PrivatHerblocation not on record | 2 |
| St. Paul, US | 2 |
| Rovaniemi, FI | 2 |
| Chapel Hill, US | 2 |
| Asheville, US | 2 |
| Naturalis Biodiversity Centerlocation not on record | 2 |
| Tomioka, JP | 2 |
| Denver, US | 1 |
| Weymouth Woods Sandhills Nature Preservelocation not on record | 1 |
| University of British Columbialocation not on record | 1 |
| Moscow University Herbarium (MW)location not on record | 1 |
| Royal Botanic Gardens, Kewlocation not on record | 1 |
| FLADlocation not on record | 1 |
| Emporia, US | 1 |
| Anhui Normal Universitylocation not on record | 1 |
| Universität Erlangen-Nürnberglocation not on record | 1 |
| Ivano-Frankove, UA | 1 |
| University of Wisconsinlocation not on record | 1 |
| Lubbock, US | 1 |
| Lanzhou, CN | 1 |
| Columbia, US | 1 |
| GZUlocation not on record | 1 |
| Anchorage, US | 1 |
| Saint Louis, US | 1 |
| Sapporo, JP | 1 |
| Western Carolina Universitylocation not on record | 1 |
| Durham, US | 1 |
| Spearfish, US | 1 |
| Smithsonian Institutionlocation not on record | 1 |
| NoColllocation not on record | 1 |
| The Tula Region State Institution of Culture "Tula Museum Association"location not on record | 1 |
| LfUlocation not on record | 1 |
| Whitehorse, CA | 1 |
| University of British Columbia, Herbariumlocation not on record | 1 |
| Kew, GB | 1 |
| Cambridge, US | 1 |
| WNNUlocation not on record | 1 |
| Beijing Normal Universitylocation not on record | 1 |
| WINlocation not on record | 1 |
| Baltimore, US | 1 |
| Shanghai, CN | 1 |
| Nanjing, CN | 1 |
| Chongqing Museumlocation not on record | 1 |
Where the DNA of Hypopitys monotropa was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.