Hyparrhenia rufa
(Nees) Stapf · speciesAt a glance
Sources11 archives
Databases and archives Hyparrhenia rufa's data was compiled from.
WikipediaWikimedia Foundation7 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility6 267 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI5 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics8 specimens↗
NCBIUS National Library of Medicinesequences↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
PloiDBPloidy Databasegenome & karyotype
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Hyparrhenia rufa is a species of grass known by the common names jaraguá,Hyparrhenia rufa (Nees) Stapf. FAO. jaraguá grass, and giant thatching grass. It is native to Africa and it is widespread in the world as a cultivated forage and fodder for livestock and a naturalized and sometimes invasive species.
No narrative description available for this taxon yet.
Size & morphology15
Life cycle & reproduction12
Diet & foraging1
Habitat & environment12
Physiology & chemistry7
Other traits2
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Hyparrhenia rufa has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Hyparrhenia rufa carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 404×CCDB · ipcn-api-dl · CCDB · book-ipcn73-74 · CCDB · book-indian_vol2 +1
2n 203×CCDB · book-ipcn65 · CCDB · ipcn-api-dl · CCDB · book-indian_vol2
2n 303×CCDB · book-indian_vol2 · CCDB · Cave1956
2n 363×CCDB · book-ipcn65 · CCDB · ipcn-api-dl · CCDB · book-indian_vol2
2n 601×CCDB · book-indian_vol2
n 151×CCDB · ipcn-api-dl
polyploid inferred1×PloiDB · genus-scale
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
Record type6 267 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions104 of 247 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Saint Louis, US | 458 |
| KMCClocation not on record | 312 |
| MeiseBGlocation not on record | 254 |
| Kew, GB | 181 |
| Durango, MX | 172 |
| UFMSlocation not on record | 126 |
| Bronx, US | 113 |
| Pretoria, ZA | 110 |
| Mexico City, MX | 109 |
| Université de Bordeauxlocation not on record | 93 |
| National Biodiversity Institute, Costa Ricalocation not on record | 91 |
| University of Stellenboschlocation not on record | 86 |
| Yaoundé, CM | 64 |
| Forest Herbarium Ibadan (FHI)location not on record | 52 |
| EFGlocation not on record | 44 |
| Xiamen, CN | 40 |
| Antiguo Cuscatlán, SV | 39 |
| Tampa, US | 36 |
| WAGlocation not on record | 35 |
| Parc Botanique et Zoologique de Tsimbazaza (PBZT)location not on record | 34 |
| Brasília, BR | 32 |
| UnBlocation not on record | 32 |
| Brisbane, AU | 32 |
| Paris, FR | 30 |
| Cenargenlocation not on record | 27 |
| HNBlocation not on record | 26 |
| Brasília, BR | 25 |
| Instituto de Investigaciones Biológicas, Universidad Veracruzana, Región Xalapalocation not on record | 22 |
| Adam Mickiewicz University in Poznańlocation not on record | 21 |
| Mérida, MX | 20 |
| Frankfurt am Main | 18 |
| Embrapa Agrobiology Diazothrophic Microbial Culture Collectionlocation not on record | 18 |
| Philadelphia, US | 18 |
| LSF/FSA/UAClocation not on record | 17 |
| Berlin, DE | 16 |
| Miami, US | 16 |
| Istituto Agrario Castelnuovolocation not on record | 16 |
| Plocation not on record | 15 |
| JBRJlocation not on record | 15 |
| Universidade Federal do Rio Grande do Nortelocation not on record | 14 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 14 |
| Universidad Nacional de Colombia (UNAL)location not on record | 14 |
| Mount Annan, AU | 14 |
| Ann Arbor, US | 14 |
| CNF-UFHBlocation not on record | 14 |
| Palmerston, AU | 14 |
| Ciudad de México, MX | 13 |
| Universidad de Caldas (UCaldas)location not on record | 13 |
| Museo Entomologico de Leonlocation not on record | 13 |
| Laboratorio de Ictiologialocation not on record | 13 |
| Altos de Pipe, VE | 13 |
| Tapachula, MX | 13 |
| San José, CR | 12 |
| Mexico City, MX | 11 |
| Instituto de Investigação Científica Tropicallocation not on record | 10 |
| Riverside, US | 10 |
| Zapopan, MX | 10 |
| Aarhus, DK | 10 |
| Instituto Amazónico de Investigaciones Científicas - SINCHIlocation not on record | 10 |
| Guatemala City, GT | 9 |
| Universidad del Quindío (UniQuindío)location not on record | 9 |
| MEXUlocation not on record | 9 |
| Museu Paraense Emílio Goeldilocation not on record | 9 |
| MAlocation not on record | 9 |
| IPA/SPlocation not on record | 8 |
| TAFORI-LSRClocation not on record | 8 |
| Chapingo, MX | 8 |
| Mérida, MX | 8 |
| Salvador, BR | 7 |
| Tuxtla Gutiérrez, MX | 7 |
| International Salmonella Centre (W.H.O.)location not on record | 7 |
| Chicago, US | 7 |
| Instituto Nacional de Pesquisas da Amazônia (INPA)location not on record | 7 |
| San Isidro, AR | 7 |
| Uppsala, SE | 7 |
| Clocation not on record | 7 |
| EAlocation not on record | 7 |
| Torreón, MX | 7 |
| LSFlocation not on record | 7 |
| Addis Ababa, ET | 7 |
| Haramaya Universitylocation not on record | 6 |
| Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH)location not on record | 6 |
| Austin, US | 6 |
| Bogotá, D.C., CO | 6 |
| Durham, US | 6 |
| UNESP-ISlocation not on record | 6 |
| Canberra, AU | 6 |
| UNICAMPlocation not on record | 6 |
| Stockholm, SE | 6 |
| Université du Lomélocation not on record | 5 |
| Universidade Federal de Goiáslocation not on record | 5 |
| Tuxtla Gutiérrez, MX | 5 |
| Universidad Católica de Oriente (UCO)location not on record | 5 |
| UFERSAlocation not on record | 5 |
| CASlocation not on record | 5 |
| San Francisco de Campeche, MX | 5 |
| León, NI | 5 |
| ASUlocation not on record | 5 |
| Departamento de Sistematica e Ecologialocation not on record | 5 |
| BISHlocation not on record | 5 |
| Feira de Santana, BR | 5 |
| St. Augustine, TT | 5 |
| Sangmiung Universitylocation not on record | 5 |
| Cambridge, US | 4 |
| Chongqing Museumlocation not on record | 4 |
| Université National du Béninlocation not on record | 4 |
| Universidade Federale do Rio Grande do Sullocation not on record | 4 |
| UNIVILLElocation not on record | 4 |
| Santa Cruz de la Sierra, BO | 4 |
| Uberlândia, BR | 4 |
| Centre Suisse de Recherches Scientifiques en Côte d’Ivoirelocation not on record | 4 |
| Universiti Sains Malaysialocation not on record | 4 |
| Logan, US | 4 |
| USP-IBlocation not on record | 4 |
| Universidad Juárez Autónoma de Tabascolocation not on record | 4 |
| Embrapa Amazônia Oriental, Ministry of Agriculturelocation not on record | 4 |
| Calabar, NG | 4 |
| UNEMATlocation not on record | 4 |
| Blumenau, BR | 4 |
| Odawara, JP | 4 |
| UFBAlocation not on record | 4 |
| Valdosta State Universitylocation not on record | 3 |
| UNIVASFlocation not on record | 3 |
| HUT Culture Collectionlocation not on record | 3 |
| PRClocation not on record | 3 |
| Universidad Nacional Agrarialocation not on record | 3 |
| UFABClocation not on record | 3 |
| Masindi, UG | 3 |
| Wlocation not on record | 3 |
| UNESP-FCAlocation not on record | 3 |
| Austin, US | 3 |
| Pontificia Universidad Javeriana (PUJ)location not on record | 3 |
| Autlán de Navarro, MX | 3 |
| UEPAlocation not on record | 3 |
| Smithfield, AU | 3 |
| Herbier National du Gabonlocation not on record | 3 |
| Centre National de la Recherche Scientifique et Technologique / Institut de l'environnement et de recherches agricoleslocation not on record | 3 |
| Honolulu, US | 3 |
| Universidad del Valle (UV)location not on record | 3 |
| Auckland, NZ | 3 |
| BRLUlocation not on record | 3 |
| Jena Microbial Resource Collectionlocation not on record | 3 |
| Area de Conservacion Guanacastelocation not on record | 3 |
| INMAlocation not on record | 3 |
| Jataí / Setor Industrial, BR | 3 |
| Santa Teresa, BR | 3 |
| BClocation not on record | 3 |
| Universidad de El Salvadorlocation not on record | 3 |
| Universidade Federal do Ceara, Departamento de Biologialocation not on record | 3 |
| Universidade Federal de Mato Grosso do Sul, Campus do Pantanallocation not on record | 2 |
| Lima, PE | 2 |
| Forestry Research Institute of Nigerialocation not on record | 2 |
| UTFPR-CPlocation not on record | 2 |
| UFMGlocation not on record | 2 |
| LISClocation not on record | 2 |
| University of Oxfordlocation not on record | 2 |
| Adelaide, AU | 2 |
| Cusco, PE | 2 |
| Centro de Pesquisas Agropecuarias do Tropico Umidolocation not on record | 2 |
| Comisión Técnico Consultiva de Coeficientes de Agostaderolocation not on record | 2 |
| UNESP, Campus São José Rio Prêtolocation not on record | 2 |
| Federal University of Espírito Santolocation not on record | 2 |
| Kensington, AU | 2 |
| UFRPElocation not on record | 2 |
| Edinburgh, GB | 2 |
| UFSClocation not on record | 2 |
| UFESlocation not on record | 2 |
| UFPElocation not on record | 2 |
| Fortaleza, BR | 2 |
| Cape Town, ZA | 2 |
| Corrientes, AR | 2 |
| Ivano-Frankivsk, UA | 2 |
| HUENFlocation not on record | 2 |
| Iquitos, PE | 2 |
| Londrina, BR | 2 |
| Universidad Industrial de Santander (UIS)location not on record | 2 |
| Queen Sirikit Botanic Garden, The Botanical Garden Organizationlocation not on record | 2 |
| OTSlocation not on record | 2 |
| Universidade Federal do Maranhãolocation not on record | 2 |
| DOI/NPS, Greenbelt Parklocation not on record | 2 |
| Ciudad de México, MX | 2 |
| Madison, US | 2 |
| Mexico City, MX | 2 |
| Bloomington, US | 2 |
| South Kensington, GB | 2 |
| Jardín Botánico de Cartagena "Guillermo Piñeres" (JBC)location not on record | 2 |
| Universidade Federal de Santa Catarinalocation not on record | 2 |
| Institut de Recherche Agronomique de Guinée (IRAG)location not on record | 2 |
| GAlocation not on record | 1 |
| Montréal, CA | 1 |
| Universidade Federal do Espírito Santolocation not on record | 1 |
| San Angelo, US | 1 |
| Leiden University Medical Centerlocation not on record | 1 |
| Castelar, AR | 1 |
| Seychelles National Herbariumlocation not on record | 1 |
| Mlocation not on record | 1 |
| FLASlocation not on record | 1 |
| California Academy of Scienceslocation not on record | 1 |
| Knoxville, US | 1 |
| Cochabamba, BO | 1 |
| Glocation not on record | 1 |
| Universidad de Córdoba (UC)location not on record | 1 |
| Paleontological Collectionlocation not on record | 1 |
| Minia, EG | 1 |
| DSMlocation not on record | 1 |
| Guangzhou, CN | 1 |
| Montecillo, Texcoco, MX | 1 |
| Campo Mourão, BR | 1 |
| UFSMlocation not on record | 1 |
| La Paz, BO | 1 |
| Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record | 1 |
| Moscow State Universitylocation not on record | 1 |
| Dekalb, US | 1 |
| Culiacán, MX | 1 |
| Departamento de Geologia, Universidad de Chilelocation not on record | 1 |
| Guasave, MX | 1 |
| HEMlocation not on record | 1 |
| GENTlocation not on record | 1 |
| University of Hamburglocation not on record | 1 |
| LDlocation not on record | 1 |
| Zlocation not on record | 1 |
| HUAlocation not on record | 1 |
| Gump Stationlocation not on record | 1 |
| UNESClocation not on record | 1 |
| EL PASO, US | 1 |
| Coimbra, PT | 1 |
| Université de Kisanganilocation not on record | 1 |
| Pelotas, BR | 1 |
| Museu Nacional, Universidade Federal do Rio de Janeirolocation not on record | 1 |
| Cruz das Almas, BR | 1 |
| Arusha, TZ | 1 |
| Herbario Selva Central Oxapampa - estación biológica del Jardín Botánico de Missourilocation not on record | 1 |
| Ural Federal University "B. N. Yeltsin"location not on record | 1 |
| Goucher Collegelocation not on record | 1 |
| Canadian Department of Agriculturelocation not on record | 1 |
| Juriquilla, MX | 1 |
| LNBG$location not on record | 1 |
| BMlocation not on record | 1 |
| Department of National Parks, Wildlife and Plant Conservationlocation not on record | 1 |
| Senckenberg Gesellschaft für Naturforschung: Senckenberg Forschungsinstitut und Naturmuseumlocation not on record | 1 |
| Helsinki, FI | 1 |
| Fort Worth, US | 1 |
| Hermosillo, MX | 1 |
| Sociedad para el Estudio de los Recursos Bióticos de Oaxaca, A. C.location not on record | 1 |
| UNESP-RClocation not on record | 1 |
| UTFPR-SLlocation not on record | 1 |
| Criciúma, BR | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Hyparrhenia rufa was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.