Gossypium hirsutum
speciesAt a glance
Sources16 archives
Databases and archives Gossypium hirsutum's data was compiled from.
WikipediaWikimedia Foundation14 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility8 909 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI101 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics226 specimens↗
NCBIUS National Library of Medicinesequences↗
LOTUSNatural Products (Wikidata)compounds↗
NPASSNat. Product Activity & Species Sourcecompounds↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
giftgenome & karyotype
GoaTGenomes on a Tree · Sangergenome & karyotype↗
PloiDBPloidy Databasegenome & karyotype
WikidataWikimedia Foundationstructured facts↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Gossypium hirsutum, also known as upland cotton or Mexican cotton, is the most widely planted species of cotton in the world. Globally, about 90% of all cotton production is of cultivars derived from this species.World Cotton Production, Yara North America In the United States, the world's largest exporter of cotton, it constitutes approximately 95% of all cotton production. It is native to Mexico, the West Indies, northern South America, Central America and possibly tropical Florida. Archeological evidence from the Tehuacan Valley in Mexico shows the cultivation of this species as long ago as 3,500 BC, although there is as yet no evidence as to exactly where it may have been first domesticated. This is the earliest evidence of cotton cultivation in the Americas found thus far. Gossypium hirsutum includes a number of varieties or cross-bred cultivars with varying fiber lengths and tolerances to a number of growing conditions. The longer length varieties are called "long staple upland" and the shorter length varieties are referred to as "short staple upland". The long staple varieties are the most widely cultivated in commercial production. Besides being fibre crops, Gossypium hirsutum and Gossypium herbaceum are the main species used to produce cottonseed oil. The Zuni people use this plant to make ceremonial garments,Stevenson, Matilda Coxe 1915 Ethnobotany of the Zuni Indians. SI-BAE Annual Report #30 (p. 77) and the fuzz is made into cords and used ceremonially.Stevenson, p.92 Flowers of Gossypium hirsutum This species shows extrafloral nectar production.Röse USR, Lewis J, Tumlinson JH. Extrafloral nectar from cotton (Gossypium hirsutum) as a food source for parasitic wasps. Functional Ecology 2006; 20:67-74.
No narrative description available for this taxon yet.
Size & morphology23
Life cycle & reproduction11
Diet & foraging1
Habitat & environment14
Physiology & chemistry4
Other traits1
Compounds documented for Gossypium hirsutum across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile5 classes
Documented compounds278 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| (+)-cis-Isopulegone | present | LOTUS | |
| (+)-Isoborneol | present | LOTUS | |
| (+)-Valine | present | LOTUS | |
| (-)-alpha-Curcumene | present | LOTUS | |
| (-)-Caryophyllene | present | LOTUS | |
| (-)-delta-Cadinene | present | LOTUS | |
| (-)-epi-beta-Santalene | present | LOTUS | |
| (1,1'-Biphenyl)-2-ol | present | LOTUS | |
| (1R)-1,7-Dihydroxy-1,6-dimethyl-4-(1-methylethyl)-2(1H)-naphthalenone | present | LOTUS | |
| (1R)-1-Hydroxy-7-methoxy-1,6-dimethyl-4-(1-methylethyl)-2(1H)-naphthalenone | present | LOTUS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Gossypium hirsutum has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
Besides the big genome in the nucleus, cells carry a small, circular loop of DNA inside the cell's energy factories — the mitochondria. It is inherited almost only from the mother and is a leftover from ancient bacteria that moved into the cell. The mitochondrial markers above (ND*, COX, CYTB…) are read from exactly this loop. Outer ring = one strand, inner ring = the other.
The complete instruction manual Gossypium hirsutum carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 5228×GoaT · Kew Plant DNA C-values Database · CCDB · ipcn-api-dl · CCDB · book-indian_vol1 +5
2n 265×CCDB · ipcn-api-dl · CCDB · book-indian_vol1 · CCDB · kew +2
2n 392×CCDB · ipcn-api-dl · CCDB · book-ipcn75-78
2n 361×GIFT · GIFT (floras)
2n 381×GIFT · GIFT (floras)
n 264×CCDB · ipcn-api-dl · CCDB · book-ipcn67-71 · CCDB · book-ipcn75-78
n 391×GIFT · GIFT (floras)
tetraploid1×GoaT · Kew Plant DNA C-values Database
diploid1×GIFT · GIFT (floras)
polyploid inferred1×PloiDB · genus-scale
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
Record type8 909 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions117 of 224 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| AZE015location not on record | 1 108 |
| Mexico City, MX | 214 |
| Durango, MX | 173 |
| NPGSlocation not on record | 162 |
| Saint Louis, US | 135 |
| Mérida, MX | 106 |
| Palmerston, AU | 88 |
| Bronx, US | 61 |
| National Institute for Biotechnology and Genetic Engineeringlocation not on record | 58 |
| Canberra, AU | 53 |
| Austin, US | 51 |
| Brisbane, AU | 41 |
| Paris, FR | 40 |
| Tapachula, MX | 37 |
| National Biodiversity Institute, Costa Ricalocation not on record | 33 |
| Istituto Agrario Castelnuovolocation not on record | 30 |
| MEXUlocation not on record | 30 |
| Mexico City, MX | 29 |
| Chicago, US | 26 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 25 |
| University of Stellenboschlocation not on record | 22 |
| Museo Entomologico de Leonlocation not on record | 21 |
| Beijing, CN | 21 |
| Guangzhou, CN | 20 |
| Kensington, AU | 19 |
| Chapingo, MX | 19 |
| San Francisco de Campeche, MX | 18 |
| Fort Worth, US | 18 |
| Kew, GB | 15 |
| UFBAlocation not on record | 13 |
| Mérida, MX | 13 |
| Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH)location not on record | 13 |
| San Diego, US | 11 |
| Miami, US | 11 |
| Riverside, US | 11 |
| Tlalnepantla, MX | 11 |
| Laboratorio de Ictiologialocation not on record | 11 |
| Kunming, CN | 10 |
| Chengdu, CN | 9 |
| Mount Annan, AU | 9 |
| MeiseBGlocation not on record | 9 |
| ASUlocation not on record | 9 |
| Guilin, CN | 8 |
| Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record | 8 |
| St. Augustine, TT | 8 |
| UNIVASFlocation not on record | 8 |
| Wuzhou, CN | 7 |
| Jena Microbial Resource Collectionlocation not on record | 7 |
| San José, CR | 7 |
| Berlin, DE | 7 |
| Adelaide, AU | 7 |
| Antiguo Cuscatlán, SV | 7 |
| Yangling, CN | 6 |
| Canadian Department of Agriculturelocation not on record | 6 |
| JBRJlocation not on record | 6 |
| College Park, US | 6 |
| Salvador, BR | 5 |
| Universidad Juárez Autónoma de Tabascolocation not on record | 5 |
| HNBlocation not on record | 5 |
| UnBlocation not on record | 5 |
| Uberlândia, BR | 5 |
| Centro de Investigación en Biodiversidad y Conservación, Universidad Autónoma del Estado de Moreloslocation not on record | 5 |
| UEPAlocation not on record | 5 |
| Institute of Applied Ecology, Academia Sinicalocation not on record | 5 |
| Phoenix, US | 4 |
| UFOPlocation not on record | 4 |
| Mississippi State, US | 4 |
| Fredericksburg, US | 4 |
| INBIOlocation not on record | 4 |
| Vitoria, ES | 4 |
| UFABClocation not on record | 4 |
| South Kensington, GB | 3 |
| Philadelphia, US | 3 |
| Frankfurt am Main | 3 |
| Baroda, IN | 3 |
| Chongqing Museumlocation not on record | 3 |
| Armidale, AU | 3 |
| Tampa, US | 3 |
| UNEMATlocation not on record | 3 |
| Zürich, CH | 3 |
| Chapel Hill, US | 3 |
| Austin, US | 3 |
| UEMAlocation not on record | 3 |
| València, ES | 3 |
| Leiden University Medical Centerlocation not on record | 3 |
| Denver, US | 3 |
| Riobamba, EC | 3 |
| Conservatoire Botanique National de Mascarinlocation not on record | 3 |
| University of New Hampshirelocation not on record | 3 |
| Wuhan, CN | 3 |
| Feira de Santana, BR | 3 |
| Changsha, CN | 3 |
| Honolulu, US | 3 |
| Loja, EC | 3 |
| BISHlocation not on record | 3 |
| Columbia, US | 3 |
| Museu Nacional, Universidade Federal do Rio de Janeirolocation not on record | 3 |
| UFMSlocation not on record | 3 |
| Shanxi Universitylocation not on record | 3 |
| Universidad de Caldas (UCaldas)location not on record | 3 |
| Bangkok, TH | 3 |
| Hangzhou, CN | 3 |
| Ilhéus, BR | 3 |
| Universidade Federal do Maranhãolocation not on record | 2 |
| Minia, EG | 2 |
| Cruz das Almas, BR | 2 |
| USP-IBlocation not on record | 2 |
| Institute for Agricultural Bacteriology and Fermentation Biologylocation not on record | 2 |
| Moscow State Universitylocation not on record | 2 |
| Wuhan, CN | 2 |
| URCAlocation not on record | 2 |
| Universidad Nacional Autonoma de Mexico, Instituto de Biologialocation not on record | 2 |
| Edmonton, CA | 2 |
| Plocation not on record | 2 |
| UNESClocation not on record | 2 |
| Cenargenlocation not on record | 2 |
| Université de Bordeauxlocation not on record | 2 |
| Aarhus, DK | 2 |
| Jardín Botánico de Cartagena "Guillermo Piñeres" (JBC)location not on record | 2 |
| Instituto de Ecología, Universidad Nacional Autónoma de Méxicolocation not on record | 2 |
| WNNUlocation not on record | 2 |
| LDlocation not on record | 2 |
| UFPElocation not on record | 2 |
| Fortaleza, BR | 2 |
| Flagstaff, US | 2 |
| Parc Botanique et Zoologique de Tsimbazaza (PBZT)location not on record | 2 |
| Altos de Pipe, VE | 2 |
| Masindi, UG | 2 |
| Ciudad de México, MX | 2 |
| EL PASO, US | 2 |
| Centro Cultural Santo Domingolocation not on record | 2 |
| Pondicherry, IN | 2 |
| Valparaiso, CL | 2 |
| Instituto de Investigação Científica Tropicallocation not on record | 2 |
| MAlocation not on record | 2 |
| Mexico City, MX | 2 |
| Criciúma, BR | 2 |
| Tuxtla Gutiérrez, MX | 2 |
| Seychelles National Herbariumlocation not on record | 2 |
| John T. Waterhouse Herbariumlocation not on record | 2 |
| Chengdu, CN | 2 |
| Xiamen, CN | 2 |
| Cambridge, US | 2 |
| Jackson, US | 2 |
| Jinghong, CN | 1 |
| Bloomington, US | 1 |
| Fayetteville, US | 1 |
| San Isidro, AR | 1 |
| San Luis Obispo, US | 1 |
| Pittsburg, US | 1 |
| Universidade Federal de Santa Catarinalocation not on record | 1 |
| OTSlocation not on record | 1 |
| Wlocation not on record | 1 |
| San Francisco, US | 1 |
| Tuxtla Gutiérrez, MX | 1 |
| WTUlocation not on record | 1 |
| Montréal, CA | 1 |
| DOI/NPS, Little Rock Central High School National Historic Sitelocation not on record | 1 |
| HACAMlocation not on record | 1 |
| College of the Atlantic, Museumlocation not on record | 1 |
| Tamil Nadu Agricultural Universitylocation not on record | 1 |
| INMAlocation not on record | 1 |
| Universidad de los Andes (UniAndes)location not on record | 1 |
| Université du Lomélocation not on record | 1 |
| BGPAlocation not on record | 1 |
| Juriquilla, MX | 1 |
| UFSMlocation not on record | 1 |
| University of Hamburglocation not on record | 1 |
| Caldwell, US | 1 |
| Ojo, NG | 1 |
| Yaoundé, CM | 1 |
| Hobart, AU | 1 |
| Long Beach, US | 1 |
| AUAlocation not on record | 1 |
| NSW Office of Environment and Heritagelocation not on record | 1 |
| Corvallis, US | 1 |
| NSW Dept of Planning, Industry and Environmentlocation not on record | 1 |
| UFPIlocation not on record | 1 |
| South China Normal Universitylocation not on record | 1 |
| Museo universitario di Chietilocation not on record | 1 |
| CJBGlocation not on record | 1 |
| Claremont, US | 1 |
| Lubbock, US | 1 |
| UTFPR-DVlocation not on record | 1 |
| Empresa Pernambucana de Pesquisa Agropecuária, IPAlocation not on record | 1 |
| Universidade Federal de Mato Grosso do Sul, Campus do Pantanallocation not on record | 1 |
| Salamanca, ES | 1 |
| Universidade Federal do Ceara, Departamento de Biologialocation not on record | 1 |
| Universidade Federal de Goiáslocation not on record | 1 |
| Urumqi, CN | 1 |
| EMTCMlocation not on record | 1 |
| BMlocation not on record | 1 |
| Paleontological Collectionlocation not on record | 1 |
| Centre National d'Application des Recherches Pharmaceutiques (CNARP)location not on record | 1 |
| Conway, US | 1 |
| Autlán de Navarro, MX | 1 |
| CASlocation not on record | 1 |
| Córdoba, AR | 1 |
| Departamento de Geologia, Universidad de Chilelocation not on record | 1 |
| Universidad Nacional de Colombia (UNAL)location not on record | 1 |
| Instituto Amazónico de Investigaciones Científicas - SINCHIlocation not on record | 1 |
| Brasília, BR | 1 |
| GZUlocation not on record | 1 |
| QCNElocation not on record | 1 |
| UCAMlocation not on record | 1 |
| Giardini Botanici Hanburylocation not on record | 1 |
| Stephenville, US | 1 |
| Guangxi Institute of Traditional Medical and Pharmaceutical Scienceslocation not on record | 1 |
| Seoul, KR | 1 |
| Nanjing, CN | 1 |
| Universidad de Antioquia (UdeA)location not on record | 1 |
| Madrid, ES | 1 |
| UNESP-FCAlocation not on record | 1 |
| Chaguaramas, TT | 1 |
| CPATSAlocation not on record | 1 |
| UFERSAlocation not on record | 1 |
| GAlocation not on record | 1 |
| PUC-RSlocation not on record | 1 |
| UFSClocation not on record | 1 |
| San Diego Natural History Museum, Herbariumlocation not on record | 1 |
| Albuquerque, US | 1 |
| Brasília, BR | 1 |
| Cuiabá, BR | 1 |
| Due West, US | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Gossypium hirsutum was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.