Geum urbanum
speciesAt a glance
Sources13 archives
Databases and archives Geum urbanum's data was compiled from.
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility849 993 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI26 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics51 specimens↗
NCBIUS National Library of Medicinesequences↗
NPASSNat. Product Activity & Species Sourcecompounds↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
PloiDBPloidy Databasegenome & karyotype
Paleobiology DatabasePBDB consortiumfossil record↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
La benoîte commune ou benoîte urbaine, également appelée herbe de saint Benoît ou herbe du bon soldat, est une espèce de plantes à fleurs de la famille des Rosaceae. Elle se trouve dans toute la France continentale et en Corse, particulièrement dans les endroits frais tels que les haies, les sous-bois, les ourlets nitrophiles et seulement hygrophiles. On peut la rencontrer également de façon très abondante près des décharges.
No narrative description available for this taxon yet.
Size & morphology19
Life cycle & reproduction18
Diet & foraging2
Habitat & environment11
Physiology & chemistry8
Other traits1
Compounds documented for Geum urbanum across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile2 classes
Documented compounds11 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| 1,2,3-Benzenetriol | present | NPASS | |
| 1-[2-(2-Hydroxypropan-2-yl)-7-(3-methylbut-2-enyl)-1-benzofuran-5-yl]ethanone | present | NPASS | |
| 1-[5-Acetyl-2-(2-hydroxypropan-2-yl)-1-benzofuran-7-yl]-3-methylbut-2-en-1-one | present | NPASS | |
| 1-[5-Acetyl-2-(2-hydroxypropan-2-yl)-1-benzofuran-7-yl]-3-methylbutan-1-one | present | NPASS | |
| 1-[5-acetyl-2-hydroxy-3-[(E)-3-hydroxy-3-methylbut-1-enyl]phenyl]-3-methylbutan-1-one | present | NPASS | |
| 1-[7-[(2S)-2,3-dihydroxy-3-methylbutyl]-2-(2-hydroxypropan-2-yl)-1-benzofuran-5-yl]ethanone | present | NPASS | |
| 12-Hydroxy-2,3-dihydroeuparin | present | NPASS | |
| ODHCTXKNWHHXJC-GSVOUGTGSA-M | present | NPASS | |
| QUZPTVPAUHASLU-ZBFHGGJFSA-N | present | NPASS | |
| Sakuranetin | present | NPASS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Geum urbanum has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Geum urbanum carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 4283×GoaT · DTOL Flowering Plants Estimates Kew · GoaT · Kew Plant DNA C-values Database · CCDB · slov-fl +14
2n 211×CCDB · CromoCat 2015
2n 281×CCDB · ipcn-api-dl
n 214×CCDB · book-ipcn67-71 · CCDB · Cave1957 · CCDB · CromoCat 2015
n 141×CCDB · iapt
polyploid inferred1×PloiDB · genus-scale
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
Record type849 993 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions112 of 229 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Uniwersytet Wrocławskilocation not on record | 9 568 |
| BFLlocation not on record | 654 |
| Helsinki, FI | 614 |
| BIO-UNIPIlocation not on record | 515 |
| Olocation not on record | 329 |
| LDlocation not on record | 307 |
| Moscow State Universitylocation not on record | 249 |
| Salzburg, AT | 222 |
| MeiseBGlocation not on record | 222 |
| Trondheim, NO | 202 |
| Berlin, DE | 195 |
| Uniwersytet Rolniczy im. Hugona Kołłątaja w Krakowielocation not on record | 162 |
| Bergen, NO | 154 |
| Turku, FI | 119 |
| Adam Mickiewicz University in Poznańlocation not on record | 114 |
| Uniwersytet Warszawskilocation not on record | 109 |
| Görlitz, DE | 100 |
| SLU Artdatabankenlocation not on record | 93 |
| Oskarshamn, SE | 91 |
| KMNlocation not on record | 90 |
| Tartu, EE | 85 |
| Barcelona, ES | 84 |
| Entomological Society of Latvialocation not on record | 83 |
| València, ES | 82 |
| BDBClocation not on record | 82 |
| Kuopio, FI | 79 |
| Tallinn, EE | 77 |
| Oulu, FI | 72 |
| Provincia di Livornolocation not on record | 68 |
| Université Lavallocation not on record | 62 |
| Wlocation not on record | 55 |
| GBS RAN - Glavny Botanichesky Sad Rossijskoj Akademii Nauklocation not on record | 55 |
| BRNUlocation not on record | 53 |
| San Sebastián, ES | 52 |
| MAlocation not on record | 49 |
| BClocation not on record | 47 |
| TUR-Alocation not on record | 40 |
| South Kensington, GB | 39 |
| Vitoria, ES | 39 |
| Voronezh State Universitylocation not on record | 38 |
| Jyväskylä, FI | 33 |
| Mount Annan, AU | 31 |
| Salamanca, ES | 29 |
| WTUlocation not on record | 27 |
| Mlocation not on record | 26 |
| Uppsala, SE | 26 |
| TROMlocation not on record | 25 |
| Bern, CH | 25 |
| Universidad del Pais Vasco (UPV/EHU)location not on record | 22 |
| Ernst-Moritz-Arndt-Universitat Greifswaldlocation not on record | 22 |
| CICYTEXlocation not on record | 21 |
| Instytut Ochrony Przyrody Polskiej Akademii Nauklocation not on record | 21 |
| Museum Ludovicae Ulricae, Zoology Institute of the University of Uppsalalocation not on record | 19 |
| Santiago de Compostela, ES | 18 |
| Karlsruhe, DE | 16 |
| Tula State Lev Tolstoy Pedagogical Universitylocation not on record | 15 |
| Institut und Museum fuer Geologie und Palaeontologielocation not on record | 15 |
| Ann Arbor, US | 14 |
| Frankfurt am Main | 13 |
| Museo Achille Folettolocation not on record | 13 |
| Madrid, ES | 13 |
| Uniwersytet Śląski w Katowicachlocation not on record | 12 |
| Porvoo, FI | 12 |
| Corvallis, US | 12 |
| Natural History Museum Rotterdamlocation not on record | 11 |
| Zürich, CH | 11 |
| Porrentruy, CH | 11 |
| Moscow, US | 11 |
| Bronx, US | 11 |
| QAUlocation not on record | 10 |
| GZUlocation not on record | 10 |
| Québec, CA | 10 |
| Conservatoire botanique national du Bassin parisienlocation not on record | 9 |
| Pamplona, ES | 9 |
| Pamplona, ES | 9 |
| Madison, US | 9 |
| Canberra, AU | 9 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 9 |
| Auckland, NZ | 9 |
| Saint John, CA | 9 |
| Granada, ES | 8 |
| Uniwersytet Opolskilocation not on record | 8 |
| Uniwersytet Jagiellońskilocation not on record | 8 |
| Staatliches Museum fuer Naturkunde Karlsruhe (State Museum of Natural History)location not on record | 8 |
| CJBGlocation not on record | 8 |
| GJOlocation not on record | 8 |
| McWane Science Centerlocation not on record | 8 |
| College of the Atlantic, Museumlocation not on record | 8 |
| Tilburg, NL | 8 |
| Philadelphia, US | 8 |
| PrivatHerblocation not on record | 7 |
| Bourges, FR | 7 |
| Pullman, US | 7 |
| Stockholm, SE | 7 |
| IDElocation not on record | 7 |
| Durham, US | 7 |
| Toronto, CA | 7 |
| Boise, US | 6 |
| Chongqing Museumlocation not on record | 6 |
| Paris, FR | 6 |
| Sevilla, ES | 6 |
| Badajoz, ES | 6 |
| Portland, US | 6 |
| PRClocation not on record | 6 |
| Phyletisches Museum Jenalocation not on record | 6 |
| The Tula Region State Institution of Culture "Tula Museum Association"location not on record | 6 |
| OLAlocation not on record | 6 |
| Kew, GB | 6 |
| Tula State Universitylocation not on record | 5 |
| Beijing, CN | 5 |
| Alicante, ES | 5 |
| Forssa, FI | 5 |
| Dresden, DE | 5 |
| RJBJCIlocation not on record | 5 |
| ISAlocation not on record | 5 |
| Museo civico di Storia naturale Giacomo Doria di Genova | Giacomo Doria Natural History Museum in Genoalocation not on record | 5 |
| Museo della Bonifica di San Donà di Piavelocation not on record | 4 |
| Hobart, AU | 4 |
| Wellington, NZ | 4 |
| The State Museum-Preserve "The Kulikovo pole"location not on record | 4 |
| Tromso University Museumlocation not on record | 4 |
| Caldwell, US | 4 |
| UGentlocation not on record | 4 |
| Whitehorse, CA | 4 |
| LfUlocation not on record | 4 |
| Christchurch, NZ | 4 |
| National Museum Waleslocation not on record | 4 |
| BGBMlocation not on record | 4 |
| DOI/NPS, Little Rock Central High School National Historic Sitelocation not on record | 4 |
| Royal Botanical Gardenslocation not on record | 4 |
| Portland, US | 4 |
| Vancouver, CA | 4 |
| Columbia, US | 3 |
| Armidale, AU | 3 |
| nbflocation not on record | 3 |
| Parkville, AU | 3 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 3 |
| Winterthur, CH | 3 |
| Frauenfeld, CH | 3 |
| Rotorua, NZ | 3 |
| Burlington, US | 3 |
| University of Guelph, OAC Herbariumlocation not on record | 3 |
| Ivano-Frankove, UA | 3 |
| DBF-NHMDlocation not on record | 3 |
| Sant Julià de Lòria, AD | 3 |
| Sion, CH | 2 |
| Nijmegen, NL | 2 |
| Göteborg, SE | 2 |
| Jaén, ES | 2 |
| Museo Entomologico de Leonlocation not on record | 2 |
| Flagstaff, US | 2 |
| Brisbane, AU | 2 |
| Glarus, CH | 2 |
| *unvoucheredlocation not on record | 2 |
| Acadia Universitylocation not on record | 2 |
| Finnish Museum of Natural History, Botanical Museumlocation not on record | 2 |
| Bangkok, TH | 2 |
| ESP109location not on record | 2 |
| Canadian Department of Agriculturelocation not on record | 2 |
| BSBIlocation not on record | 2 |
| Xiamen, CN | 2 |
| Fulda, DE | 2 |
| Prioksko-Terrasnyi Biosphere Reservelocation not on record | 2 |
| Trois-Rivières, CA | 2 |
| Saint Louis, US | 2 |
| Fort Worth, US | 2 |
| Zürich, CH | 2 |
| CIBIOlocation not on record | 1 |
| Podgorica, ME | 1 |
| Namur, BE | 1 |
| H-Lippertlocation not on record | 1 |
| St. Paul, US | 1 |
| POL003location not on record | 1 |
| Riverside, US | 1 |
| NSW Dept of Planning, Industry and Environmentlocation not on record | 1 |
| IWEP FEB RASlocation not on record | 1 |
| SNSNMClocation not on record | 1 |
| H-Schuhwlocation not on record | 1 |
| University of Hamburglocation not on record | 1 |
| ULBF-AGRlocation not on record | 1 |
| JBAlocation not on record | 1 |
| Gijón, ES | 1 |
| Banyoles, ES | 1 |
| SZUlocation not on record | 1 |
| Museum of the Rockieslocation not on record | 1 |
| JBRJlocation not on record | 1 |
| Logan, US | 1 |
| New Haven, US | 1 |
| Tampa, US | 1 |
| Claremont, US | 1 |
| CEPLAClocation not on record | 1 |
| ROM020location not on record | 1 |
| Montréal, CA | 1 |
| Adelaide, AU | 1 |
| GMBAlocation not on record | 1 |
| FLADlocation not on record | 1 |
| Brookings, US | 1 |
| Royal Botanic Gardens, Kewlocation not on record | 1 |
| UoB-IBlocation not on record | 1 |
| IPE-CSIClocation not on record | 1 |
| Musée des Confluenceslocation not on record | 1 |
| UNINE:NEUlocation not on record | 1 |
| Lausanne, CH | 1 |
| Davenport, US | 1 |
| Umeå Universitylocation not on record | 1 |
| Naturalis Biodiversity Centerlocation not on record | 1 |
| Anchorage, US | 1 |
| John May Museum of Natural Historylocation not on record | 1 |
| National Botanic Garden of Waleslocation not on record | 1 |
| Chicago, US | 1 |
| B.A. Bennett Herbariumlocation not on record | 1 |
| Sede dell'Orto botanico del Museo di Storia naturale dell'Università degli Studi di Parmalocation not on record | 1 |
| Research Center in Biodiversity and Genetic Resourceslocation not on record | 1 |
| US | 1 |
| SWlocation not on record | 1 |
| DOI/NPS, Greenbelt Parklocation not on record | 1 |
| Natural History Museum, Tribhuvan Universitylocation not on record | 1 |
| Kunming, CN | 1 |
| DULlocation not on record | 1 |
| H-AkrKGlocation not on record | 1 |
| HUN003location not on record | 1 |
| ASUlocation not on record | 1 |
| Allentown, US | 1 |
| Bloomington, US | 1 |
| Wuzhou, CN | 1 |
| University of Alberta Museumslocation not on record | 1 |
| Taipei, TW | 1 |
| Oswego, US | 1 |
| John T. Waterhouse Herbariumlocation not on record | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Geum urbanum was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.