Dendroctonus ponderosae
Hopkins, 1902 · speciesAt a glance
Sources10 archives
Databases and archives Dendroctonus ponderosae's data was compiled from.
WikipediaWikimedia Foundation6 languages↗
Animal Diversity WebUniv. of Michigan MZspecies account↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility877 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI119 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics119 specimens↗
LOTUSNatural Products (Wikidata)compounds↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
Tree of SexTree of Sex Consortiumgenome & karyotype↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
The mountain pine beetle (Dendroctonus ponderosae) is a species of bark beetle native to the forests of western North America from Mexico to central British Columbia. It has a hard black exoskeleton, and measures approximately 5 mm, about the size of a grain of rice. In western North America, a recent outbreak of the mountain pine beetle and its microbial associates has affected wide areas of lodgepole pine forest, including more than 40 e6acre of forest in British Columbia. The outbreak in the Rocky Mountain National Park in Colorado began in 1996 and has caused the destruction of millions of acres/hectares of ponderosa and lodgepole pine trees. At the peak of the outbreak in 2009, over 4.0 e6acre were affected. The outbreak then declined due to better environmental conditions and the fact that many vulnerable trees had been already destroyed. Mountain pine beetles inhabit ponderosa, whitebark, lodgepole, Scots, jack, and limber pine trees. Normally, these insects play an important role in the life of a forest, attacking old or weakened trees, and speeding development of a younger forest. However, unusually hot, dry summers and mild winters in 2004–2007 throughout the United States and Canada, along with forests filled with mature lodgepole pine, led to an unprecedented epidemic. The outbreak may have been the largest forest insect blight seen in North America since European colonization. Monocultural replanting, and a century of forest fire suppression have contributed to the size and severity of the outbreak, and the outbreak itself may, with similar infestations, have significant effects on the capability of northern forests to remove greenhouse gases (such as CO2) from the atmosphere. Because of its impact on forestry, the transcriptome and the genome of the beetle have been sequenced. It was the second beetle genome to be sequenced.
No narrative description available for this taxon yet.
No structured trait data for this taxon yet.
Compounds documented for Dendroctonus ponderosae across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Documented compounds1 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| Brevicomin | present | LOTUS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Dendroctonus ponderosae has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Dendroctonus ponderosae carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 245×GoaT · Animal Chromosome Counts Database · GoaT · Tree of Sex Database · GoaT · Coleoptera Karyotype Database +1
diploid1×GoaT · Coleoptera Karyotype Database
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
Record type877 records
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions8 of 17 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Colorado State Universitylocation not on record | 229 |
| University of Alberta Museums (UAM)location not on record | 150 |
| Universidad Católica de Manizaleslocation not on record | 130 |
| St. Paul, US | 118 |
| ASUlocation not on record | 51 |
| Natural History Museum of Utahlocation not on record | 48 |
| Santa Barbara Museum of Natural Historylocation not on record | 35 |
| University of Alabamalocation not on record | 32 |
| Decorah, US | 20 |
| Helsinki, FI | 10 |
| DPIlocation not on record | 9 |
| University of Guelph, Centre for Biodiversity Genomicslocation not on record | 2 |
| Denver, US | 1 |
| Tartu, EE | 1 |
| Saint John, CA | 1 |
| Washington, US | 1 |
| US | 1 |
Where the DNA of Dendroctonus ponderosae was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.