Collybiopsis confluens

(Pers.) R.H.Petersen · species

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Fungi/Basidiomycota/Agaricomycetes/Agaricales/Omphalotaceae/Collybiopsis

At a glance

Occurrence records10 096

Data sources8

Biological traits0

DNA specimens29

eDNA detections185

Sources8 archives

Databases and archives Collybiopsis confluens's data was compiled from.

WikipediaWikimedia Foundation2 languages↗

BioWikiNetmultilingual Wikipediamultilingual↗

GBIFGlobal Biodiversity Information Facility10 096 records↗

ENAEuropean Nucleotide Archive · EMBL-EBI185 eDNA detections↗

BOLD SystemsCentre for Biodiversity Genomics29 specimens↗

GoaTGenomes on a Tree · Sangergenome & karyotype↗

NCBIUS National Library of Medicinegenome & karyotype↗

GLoBIGlobal Biotic Interactionsbiotic interactions↗

On this page5 sections

Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.

NarrativeWikipediaarticle

Occurrence & distributionGBIF10 096 records

Environmental DNA4 datasets · 10 countries185 detections

DNA & barcodingBOLD29 specimens

Genome at a glanceGoaT · NCBI≈60 Mbp

01Narrative

Der Knopfstielige Rübling (Collybiopsis confluens, syn. Marasmiellus confluens Gymnopus confluens, Collybia confluens, Marasmius archyropus) ist eine Pilzart aus der Familie der Omphalotaceae. Die Fruchtkörper erscheinen von Sommer bis Herbst in Laub- und Nadelwäldern. Der Knopfstielige Rübling ist kein Speisepilz. Weitere, kaum gebräuchliche Namen sind Knopfstiel-Blasssporrübling oder Knopfstieliger Büschelrübling.

No narrative description available for this taxon yet.

02Traits & measurements

No structured trait data for this taxon yet.

05DNA & barcoding29 specimens

A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Collybiopsis confluens has left across the world's sequence archives.

At a glance

DNA specimens29

Marker genes1

eDNA detections185

Countries10

Marker genes sequenced

★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.

★ITS

fungal barcode

06Genome at a glanceGoaT · NCBI

The complete instruction manual Collybiopsis confluens carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.

Genome sizehow big the whole instruction manual is

Genome size≈60 120 426 bp assembly estimate

Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).

BACTERIUM Carsonella ruddii0.00016 Gb

FUNGUS0.04 Gb

THIS GENOME Collybiopsis confluens0.06 Gb

INSECT0.25 Gb

HUMAN3.2 Gb

WHEAT17 Gb

FERN Tmesipteris160.45 Gb

Sequencing statusassembly quality — how far to trust these numbers

Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.

Assembly levelContig

08Occurrence & distribution

Record type10 096 records

Wild obs. + sensor9 810

Museum / vouchered286

Range

Area of Occupancy AOO17 452 km²

Wildobservation + sensor

Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.

Coordinate accuracy61% within 1 km

≤100 m 3 818≤1 km 1 906≤10 km 3 672>10 km 47

9 443 georeferenced · 367 without coordinates

Open the mapobservation + sensor9 810

Museum / Voucheredphysical evidence

Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.

Coordinate accuracy79% within 1 km

≤100 m 36≤1 km 151≤10 km 49>10 km 2

238 georeferenced · 48 without coordinates

Open the institutions mapphysical evidence286

Wildobservation + sensor

Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.

10Collections & institutions

Holding institutions4 of 18 geolocated

Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.

Institution	Specimens
Olocation not on record	74
TROMlocation not on record	73
Uniwersytet Łódzkilocation not on record	9
Trondheim, NO	8
SLU Artdatabankenlocation not on record	8
Museum Ludovicae Ulricae, Zoology Institute of the University of Uppsalalocation not on record	7
Salzburg, AT	6
IB FRC Komi SC UB RASlocation not on record	6
Zürich, CH	3
Rene Pomerleau Herbariumlocation not on record	3
Museo civico di Storia naturale Giacomo Doria di Genova \| Giacomo Doria Natural History Museum in Genoalocation not on record	3
Royal Ontario Museum, TRTC Fungariumlocation not on record	2
University of Oslo, Natural History Museumlocation not on record	2
CJBGlocation not on record	1
Gijón, ES	1
TENN-Flocation not on record	1
California State University, East Baylocation not on record	1
Colorado State Universitylocation not on record	1

18 institutions · 209 of 286 vouchered records shown · 64 without an institution code

09Environmental DNA185 detections

Where the DNA of Collybiopsis confluens was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.

Signal

Detections DNA found185

Studies independent surveys4

Countries10

Signal confidence: moderateweighed across independent studies, places & mapped detections

Where its DNA was found

0 of 185 detections have coordinates

Open the map10 countries0

Exclos (presence de sapin)Forestsoil under deciduous treesFuktig, moserik skog med graor. MorenePessiere noireGranskog med innslag av lauv, ogsa edelt

How strong is each trace?

DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.

Modelled climatemodelled

−15°Ctemperature across detection sites+40°C

Temperature median15.5 °C 6.20–17.4

Seasonal swing summer↔winter22.5 °C

Max temp (day)19.2 °C 8.90–21.1

Min temp (night)12.0 °C 3.80–13.7

Precipitation82.0 mm/mo 62.9–97.5

Air humidity62.2 % 60.3–64.9

Moisture balance-1.10 mm/mo -41.9–37.5

Vapour deficit670 Pa 356–783

Wind speed3.10 m/s 2.20–4.50

Cloud cover44.2 % 37.7–54.9

CHELSA 1981–2010, ~9 km grid, at location & month of 175 detection points · median with p10–p90 · reflects where sampling happened, not only the true niche

How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.

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The Life Data · species page · narrative wired to read_model image placeholder · 3D tilt requires an http server (WebGL)

Collybiopsis confluens

At a glance

Sources8 archives

At a glance

Genome sizehow big the whole instruction manual is

Sequencing statusassembly quality — how far to trust these numbers

Record type10 096 records

Range

Wildobservation + sensor

Museum / Voucheredphysical evidence

Wildobservation + sensor

Holding institutions4 of 18 geolocated

Signal

Where its DNA was found

How strong is each trace?

Modelled climatemodelled

Record type10 096 records