A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Circaea erubescens has left across the world's sequence archives.
At a glance
DNA specimens1
Marker genes1
GenBank sequences4
eDNA detections10
Countries2
The DNA barcodea real sequence read deposited for this species
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★ITS4
fungal barcode
06Genome at a glanceCCDB
The complete instruction manualCircaea erubescens carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
Chromosomes2n = 22 n = 11
Ploidydiploid inferred
Chromosome-count records — grouped by value · 2n = full set, n = gamete · click a value for sources & references
2n 221×CCDB · ipcn-api-dl
CCDB · ipcn-api-dl — Tanaka, R., K. Oginuma & S. Toko. 1988. Karyomorphological studies on 26 species in ten genera of the Onagraceae. Kromosomo 51–52: 1675–1696.
n 112×CCDB · ipcn-api-dl
CCDB · ipcn-api-dl — Boufford, D. E. 1982. The genus Circaea (Onagraceae) in Japan. Acta Phytotax. Geobot. 33: 28–40.
CCDB · ipcn-api-dl — Seavey, S. R. & D. E. Boufford. 1983. Observations of chromosomes in Circaea (Onagraceae). Amer. J. Bot. 70 : 1476–1481.
Ploidy records — measured levels and diploid/polyploid inferences · click for sources
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
DNA clock origin3.3 Ma TimeTree
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
DNA clock origin
08Occurrence & distribution
Record type1 507 records
Wild obs. + sensor44
Museum / vouchered1 463
Origin
Native1
Range
Area of Occupancy AOO3 780 km²
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy32% within 1 km
≤100 m 6≤1 km 2≤10 km 10>10 km 7
25 georeferenced · 19 without coordinates
Open the mapobservation + sensor44
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy19% within 1 km
≤1 km 28≤10 km 122
150 georeferenced · 1 313 without coordinates
Open the institutions mapphysical evidence1 463
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions43 of 74 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Tsukuba, JP
211
Odawara, JP
147
Nagano City, JP
137
Shinshu Universitylocation not on record
85
Beijing, CN
76
Tomioka, JP
74
Yangling, CN
73
Sanda, JP
71
Toyama, JP
53
Bando, JP
47
Kochi, JP
41
JP
36
Nagatoro-machi, Chichibu-gun, JP
32
Fukushima Universitylocation not on record
25
Chengdu, CN
25
KURAlocation not on record
23
Iwate Prefectural Museumlocation not on record
23
Guangzhou, CN
16
Osaka, JP
16
Kunming, CN
15
Wuhan, CN
13
Sagamihara, JP
13
Sendai, JP
13
Chiba, JP
13
Nanjing, CN
12
KIRMlocation not on record
10
Taipei, TW
10
Guiyang, CN
8
Omachi Alpine Museumlocation not on record
8
Sugadaira Research Station, Mountain Science Center, University of Tsukubalocation not on record
7
Taipei, TW
7
Shanghai, CN
7
Hangzhou, CN
7
Taipei, TW
7
Changsha, CN
7
Zhejiang Universitylocation not on record
6
Otaru, JP
6
Ishikawa Museum of Natural Historylocation not on record
6
Wuhan, CN
5
Nishihara, JP
4
KOMlocation not on record
4
Chengdu, CN
4
Anhui Normal Universitylocation not on record
3
WNNUlocation not on record
3
Shanghai, CN
3
Obihiro Centennial City Museumlocation not on record
3
Ann Arbor, US
3
Zhengzhou, CN
3
Strecker Museum, Baylor Universitylocation not on record
3
Nishihara, JP
3
Tokushima, JP
3
Institute for Agricultural Bacteriology and Fermentation Biologylocation not on record
2
Jishou Universitylocation not on record
2
University of Stellenboschlocation not on record
2
J.F.Oberlin Universitylocation not on record
2
San Jose State University, Museum of Birds and Mammalslocation not on record
2
Saint Louis, US
2
Guilin, CN
2
Yunnan Universitylocation not on record
2
Edinburgh, GB
2
Sapporo, JP
1
Institute of Applied Ecology, Academia Sinicalocation not on record
1
Akita Prefectural Museumlocation not on record
1
SIHUlocation not on record
1
Kyoto Universitylocation not on record
1
Jiangxi College of Traditional Chinese Medicinelocation not on record
1
Guangzhou, CN
1
Toyota city nature sanctuarylocation not on record
1
Sichuan Grassland Research Institutelocation not on record
1
Seoul, KR
1
HUFDlocation not on record
1
National Institute of Biological Resourceslocation not on record
1
Hangzhou Normal Collegelocation not on record
1
Parthenon Tama History Museumlocation not on record
1
74 institutions · 1 462 of 1 463 vouchered records shown · 1 without an institution code
09Environmental DNA10 detections
Where the DNA of Circaea erubescens was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Detections DNA found10
Studies independent surveys2
Countries2
Signal confidence: moderateweighed across independent studies, places & mapped detections
Where its DNA was found
0 of 10 detections have coordinates
Open the map2 countries0
How strong is each trace?
DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.
Modelled climatemodelled
−15°Ctemperature across detection sites+40°C
Temperature median17.2 °C 16.5–17.2
Seasonal swing summer↔winter22.1 °C
Max temp (day)21.4 °C 20.1–21.4
Min temp (night)12.8 °C 12.8–13.1
Precipitation84.9 mm/mo 84.9–94.8
Air humidity61.0 % 61.0–61.5
Moisture balance-43.2 mm/mo -43.2–-16.5
Vapour deficit775 Pa 730–775
Wind speed3.50 m/s
Cloud cover36.1 % 36.1–41.9
CHELSA 1981–2010, ~9 km grid, at location & month of 5 detection points · median with p10–p90 · reflects where sampling happened, not only the true niche
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.