A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Carex thunbergii has left across the world's sequence archives.
At a glance
DNA specimens3
Marker genes3
GenBank sequences7
eDNA detections3
Countries1
The DNA barcodea real sequence read deposited for this species
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★rbcL3★ITS4★ITS2
plant barcodefungal barcode
06Genome at a glanceGoaT
The complete instruction manualCarex thunbergii carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Genome size293 400 000 bp
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
BACTERIUM Carsonella ruddii0.00016 Gb
FUNGUS0.04 Gb
INSECT0.25 Gb
THIS GENOME Carex thunbergii0.29 Gb
HUMAN3.2 Gb
WHEAT17 Gb
FERN Tmesipteris160.45 Gb
07Deep time~0 Ma lineage
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
DNA clock origin0 Ma TimeTree
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
DNA clock origin
08Occurrence & distribution
Record type1 880 records
Wild obs. + sensor136
Museum / vouchered1 744
Origin
Native2
Range
Area of Occupancy AOO4 196 km²
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy6% within 1 km
≤100 m 3≤10 km 25>10 km 22
50 georeferenced · 86 without coordinates
Open the mapobservation + sensor136
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy6% within 1 km
≤1 km 10≤10 km 164>10 km 1
175 georeferenced · 1 569 without coordinates
Open the institutions mapphysical evidence1 744
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions28 of 53 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Nagano City, JP
296
Odawara, JP
160
Shinshu Universitylocation not on record
151
Tsukuba, JP
100
Bando, JP
99
Fukushima Universitylocation not on record
95
Toyama, JP
95
Chiba, JP
82
Nagatoro-machi, Chichibu-gun, JP
79
Akita Prefectural Museumlocation not on record
75
Sanda, JP
68
Sendai, JP
65
Tomioka, JP
47
SIHUlocation not on record
37
JP
36
KIRMlocation not on record
35
Kushiro City Museumlocation not on record
28
KURAlocation not on record
19
Hokkaido University Botanic Gardenlocation not on record
18
Toyota city nature sanctuarylocation not on record
15
Sugadaira Research Station, Mountain Science Center, University of Tsukubalocation not on record
15
Kawasaki Shi Tama Ku, JP
14
Omachi Alpine Museumlocation not on record
13
Parthenon Tama History Museumlocation not on record
11
KOMlocation not on record
11
Forest Survey and Design Institute, Forestry Administrative Bureau of Daxinganlinglocation not on record
7
Iwate Prefectural Museumlocation not on record
6
Hokkaido University Museumlocation not on record
6
Nishihara, JP
6
GBS RAN - Glavny Botanichesky Sad Rossijskoj Akademii Nauklocation not on record
5
Kyoto Universitylocation not on record
5
Osaka, JP
5
Otaru, JP
5
KR
4
Beijing, CN
4
J.F.Oberlin Universitylocation not on record
3
WTUlocation not on record
3
Museum Of Natural And Environmental History, Shizuokalocation not on record
3
Plocation not on record
2
Sapporo, JP
2
Taipei, TW
2
University of Stellenboschlocation not on record
1
Bronx, US
1
Christchurch, NZ
1
Berlin, DE
1
Awka, NG
1
Wuhan, CN
1
DOI/NPS, Colonial National Historical Parklocation not on record
1
Sagamihara, JP
1
Ann Arbor, US
1
ifplocation not on record
1
Burlington, US
1
Nishihara, JP
1
53 institutions · 1 744 of 1 744 vouchered records shown
09Environmental DNA3 detections
Where the DNA of Carex thunbergii was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Detections DNA found3
Studies independent surveys1
Signal confidence: weakweighed across independent studies, places & mapped detections
Where its DNA was found
0 of 3 detections have coordinates
Open the map0 countries0
How strong is each trace?
DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.