Avicennia germinans
(L.) L. · speciesAt a glance
Sources11 archives
Databases and archives Avicennia germinans's data was compiled from.
WikipediaWikimedia Foundation10 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility30 291 records↗
OBISOcean Biodiversity Information System17 298 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI115 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics43 specimens↗
NCBIUS National Library of Medicinesequences↗
LOTUSNatural Products (Wikidata)compounds↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
WikidataWikimedia Foundationstructured facts↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Avicennia germinans, the black mangrove, is a shrub or small tree growing up to 12 meters (39 feet) in the acanthus family, Acanthaceae. It grows in tropical and subtropical regions of the Americas, on both the Atlantic and Pacific Coasts, and on the Atlantic Coast of tropical Africa, where it thrives on the sandy and muddy shores where seawater reaches. It is common throughout coastal areas of Texas and Florida, and ranges as far north as southern Louisiana and coastal Georgia in the United States. Like many other mangrove species, it reproduces by vivipary. Seeds are encased in a fruit, which reveals the germinated seedling when it falls into the water. Unlike other mangrove species, it does not grow on prop roots, but possesses pneumatophores that allow its roots to breathe even when submerged. It is a hardy species and expels absorbed salt mainly from its leathery leaves. The name "black mangrove" refers to the color of the trunk and heartwood. The leaves often appear whitish from the salt excreted at night and on cloudy days. It is often found in its native range with the red mangrove (Rhizophora mangle) and the white mangrove (Laguncularia racemosa). White mangroves grow inland from black mangroves, which themselves grow inland from red mangroves. The three species work together to stabilize the shoreline, provide buffers from storm surges, trap debris and detritus brought in by tides, and provide feeding, breeding, and nursery grounds for a great variety of fish, shellfish, birds, and other wildlife.
No narrative description available for this taxon yet.
Size & morphology5
Life cycle & reproduction28
Diet & foraging1
Habitat & environment27
Physiology & chemistry25
Uses & economy15
Other traits7
Compounds documented for Avicennia germinans across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile4 classes
Documented compounds5 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| (+)-Syringaresinol | present | LOTUS | |
| (1S,4aS,7S,7aS)-1-[(2S,3R,4S,5S,6R)-3-[(E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-7-hydroxy-7-methyl-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylic acid | present | LOTUS | |
| (1S,4aS,7S,7aS)-1-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-7-hydroxy-7-methyl-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylic acid | present | LOTUS | |
| Npc216413 | present | LOTUS | |
| Verbascoside | present | LOTUS |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Avicennia germinans has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
Record type47 589 records
Origin
Range
Depth
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions85 of 295 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Mexico City, MX | 641 |
| Durango, MX | 357 |
| Saint Louis, US | 332 |
| Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH)location not on record | 205 |
| National Biodiversity Institute, Costa Ricalocation not on record | 164 |
| Mérida, MX | 99 |
| Tampa, US | 85 |
| Centro de Investigación en Biodiversidad y Conservación, Universidad Autónoma del Estado de Moreloslocation not on record | 67 |
| San Diego, US | 66 |
| Bronx, US | 64 |
| University of Stellenboschlocation not on record | 58 |
| MeiseBGlocation not on record | 45 |
| Austin, US | 41 |
| Jena Microbial Resource Collectionlocation not on record | 38 |
| IECOSlocation not on record | 36 |
| Riverside, US | 33 |
| La Paz, MX | 32 |
| Kew, GB | 32 |
| St. Augustine, TT | 27 |
| Universidad de Antioquia (UdeA)location not on record | 27 |
| IFAN Ch. A. Dioplocation not on record | 23 |
| Altos de Pipe, VE | 23 |
| Miami, US | 23 |
| Antiguo Cuscatlán, SV | 21 |
| Puerto Ayora, EC | 21 |
| WAGlocation not on record | 19 |
| UEPAlocation not on record | 18 |
| Mérida, MX | 17 |
| Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record | 16 |
| Berlin, DE | 15 |
| MEXUlocation not on record | 14 |
| Paris, FR | 14 |
| San José, CR | 14 |
| Chaguaramas, TT | 14 |
| LSF/FSA/UAClocation not on record | 13 |
| Embrapa Agrobiology Diazothrophic Microbial Culture Collectionlocation not on record | 12 |
| MAlocation not on record | 12 |
| Chapingo, MX | 11 |
| Universidade Federal do Espírito Santolocation not on record | 11 |
| HNBlocation not on record | 11 |
| Tapachula, MX | 11 |
| San Francisco de Campeche, MX | 10 |
| LBVlocation not on record | 10 |
| Herbier National du Gabonlocation not on record | 10 |
| Universidade Federal do Maranhãolocation not on record | 9 |
| UNICAMPlocation not on record | 9 |
| Mexico City, MX | 8 |
| Masindi, UG | 8 |
| Arizona State University Biocollectionslocation not on record | 8 |
| Universidade Federal de Sergipe (UFS)location not on record | 8 |
| Yaoundé, CM | 8 |
| Universidad Juárez Autónoma de Tabascolocation not on record | 8 |
| Departamento de Sistematica e Ecologialocation not on record | 8 |
| Jardín Botánico de Cartagena "Guillermo Piñeres" (JBC)location not on record | 8 |
| Laboratorio de Ictiologialocation not on record | 8 |
| The University of Arizonalocation not on record | 7 |
| Universidade Federal do Ceara, Departamento de Biologialocation not on record | 7 |
| Area de Conservacion Guanacastelocation not on record | 7 |
| Hermosillo, MX | 6 |
| Culiacán, MX | 6 |
| Universidad Nacional de Colombia (UNAL)location not on record | 6 |
| Sociedad para el Estudio de los Recursos Bióticos de Oaxaca, A. C.location not on record | 6 |
| Mexico City, MX | 6 |
| León, NI | 6 |
| Austin, US | 6 |
| Pretoria, ZA | 5 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 5 |
| Fortaleza, BR | 5 |
| Leiden University Medical Centerlocation not on record | 5 |
| NHMJlocation not on record | 5 |
| Université de Bordeauxlocation not on record | 5 |
| Tuxtla Gutiérrez, MX | 5 |
| JBRJlocation not on record | 5 |
| CASlocation not on record | 5 |
| Aarhus, DK | 5 |
| Loja, EC | 4 |
| National Herbarium of São Tomé and Principelocation not on record | 4 |
| Museu Paraense Emílio Goeldilocation not on record | 4 |
| Brasília, BR | 4 |
| Forestry Research Institute of Nigerialocation not on record | 4 |
| Phoenix, US | 4 |
| Ilhéus, BR | 4 |
| Glocation not on record | 4 |
| Instituto de Ecología Aplicada, Universidad Autónoma de Tamaulipaslocation not on record | 4 |
| Feira de Santana, BR | 4 |
| Montréal, CA | 4 |
| Chicago, US | 4 |
| Plocation not on record | 4 |
| Guatemala City, GT | 4 |
| B, CASlocation not on record | 4 |
| XALlocation not on record | 3 |
| Universidade Federal do Rio Grande do Nortelocation not on record | 3 |
| UFERSAlocation not on record | 3 |
| HUAlocation not on record | 3 |
| Universidad de Caldas (UCaldas)location not on record | 3 |
| Mazatlán, MX | 3 |
| LDlocation not on record | 3 |
| San Francisco, US | 3 |
| J, NYlocation not on record | 3 |
| Frankfurt am Main | 3 |
| San Luis Potosí, MX | 3 |
| CEPLAClocation not on record | 3 |
| Universidade Federal de Juiz de Foralocation not on record | 3 |
| LISClocation not on record | 3 |
| Claremont, US | 3 |
| Irvine, US | 3 |
| UEMAlocation not on record | 3 |
| Clocation not on record | 3 |
| Goucher Collegelocation not on record | 3 |
| Calabar, NG | 3 |
| BRLUlocation not on record | 2 |
| CNF-UFHBlocation not on record | 2 |
| Universidad de Autonoma de Baja Californialocation not on record | 2 |
| Riobamba, EC | 2 |
| QCNElocation not on record | 2 |
| Edinburgh, GB | 2 |
| Departamento de Geologia, Universidad de Chilelocation not on record | 2 |
| Managua, NI | 2 |
| Istituto Agrario Castelnuovolocation not on record | 2 |
| Uppsala, SE | 2 |
| Tuxtla Gutiérrez, MX | 2 |
| Empresa Pernambucana de Pesquisa Agropecuária, IPAlocation not on record | 2 |
| I, DSlocation not on record | 2 |
| Universidad Autónoma de Occidentelocation not on record | 2 |
| A, MEXUlocation not on record | 2 |
| UNIVASFlocation not on record | 2 |
| Museum of Zoologylocation not on record | 2 |
| M, B, XALlocation not on record | 2 |
| G, C, MEXU, XALlocation not on record | 2 |
| Llocation not on record | 2 |
| Federal University of Espírito Santolocation not on record | 2 |
| Universidade Federal do Vale do São Franciscolocation not on record | 2 |
| Botanic Gardenlocation not on record | 2 |
| GAlocation not on record | 2 |
| McWane Science Centerlocation not on record | 2 |
| BMlocation not on record | 2 |
| C, B, MEXUlocation not on record | 2 |
| MEXU, MOlocation not on record | 2 |
| Brussels, BE | 2 |
| MO, USlocation not on record | 2 |
| San Juan College School of Science Math & Engineeringlocation not on record | 2 |
| Tlalnepantla, MX | 2 |
| Millersville, US | 2 |
| Stockholm, SE | 2 |
| Londrina, BR | 1 |
| Severin-McDaniel Insect Collectionlocation not on record | 1 |
| Zürich, CH | 1 |
| S, Z, G, MOlocation not on record | 1 |
| VALElocation not on record | 1 |
| Cambridge, US | 1 |
| Beijing, CN | 1 |
| Tall Timbers Research Stationlocation not on record | 1 |
| Salamanca, ES | 1 |
| G, C, XALlocation not on record | 1 |
| LSFlocation not on record | 1 |
| Northridge, US | 1 |
| A, MEXU, NYlocation not on record | 1 |
| J, F, CASlocation not on record | 1 |
| W, MICHlocation not on record | 1 |
| R, G, CASlocation not on record | 1 |
| M, XALlocation not on record | 1 |
| Universidad de Córdoba (UniCórdoba)location not on record | 1 |
| UTPLlocation not on record | 1 |
| J, Flocation not on record | 1 |
| Universidade Federal de Santa Catarinalocation not on record | 1 |
| Canadian Department of Agriculturelocation not on record | 1 |
| I, CAS, DS, F, UClocation not on record | 1 |
| Ciudad de México, MX | 1 |
| Universidad de San Carlos de Guatemalalocation not on record | 1 |
| R, MICHlocation not on record | 1 |
| E, MEXUlocation not on record | 1 |
| Anton de Kom University of Surinamelocation not on record | 1 |
| Instituto Amazónico de Investigaciones Científicas - SINCHIlocation not on record | 1 |
| Wlocation not on record | 1 |
| Porto Alegre, BR | 1 |
| OTSlocation not on record | 1 |
| L, CAS, XALlocation not on record | 1 |
| M, O, MEXU, XALlocation not on record | 1 |
| UFRRJlocation not on record | 1 |
| A, Flocation not on record | 1 |
| Salvador, BR | 1 |
| Ulocation not on record | 1 |
| Instituto de Investigaciones Biológicas, Universidad Veracruzana, Región Xalapalocation not on record | 1 |
| Facultad de Biología, Universidad Veracruzana, Región Xalapalocation not on record | 1 |
| UnBlocation not on record | 1 |
| A, MEXU, XALlocation not on record | 1 |
| Teresina, BR | 1 |
| Wuzhou, CN | 1 |
| Los Angeles, US | 1 |
| A, M, CASlocation not on record | 1 |
| A, XALlocation not on record | 1 |
| A, DSlocation not on record | 1 |
| F, DSlocation not on record | 1 |
| F, H, MEXU, XALlocation not on record | 1 |
| Universidade Federal de Goiáslocation not on record | 1 |
| P, C, XALlocation not on record | 1 |
| Ann Arbor, US | 1 |
| EAlocation not on record | 1 |
| Helsinki, FI | 1 |
| J, XALlocation not on record | 1 |
| IFANlocation not on record | 1 |
| S, A, C, V, MEXUlocation not on record | 1 |
| J, CAS, UClocation not on record | 1 |
| S, J, Klocation not on record | 1 |
| Universidad Nacional Agrarialocation not on record | 1 |
| S, R, MEXUlocation not on record | 1 |
| C, A, MEXU, MICH, NYlocation not on record | 1 |
| K, UClocation not on record | 1 |
| Universidad de los Andes (UniAndes)location not on record | 1 |
| J, O, DS, H, CAS, F, K, NYlocation not on record | 1 |
| Instituto de invertigación de recursos biológicos Alexander von Humboldt (IAvH)location not on record | 1 |
| The Huntington Library, Art Museum, and Botanical Gardenslocation not on record | 1 |
| EL PASO, US | 1 |
| F, A, CASlocation not on record | 1 |
| Universidad Industrial de Santander (UIS)location not on record | 1 |
| UFBAlocation not on record | 1 |
| G, MOlocation not on record | 1 |
| Smithsonian Institution, National Museum of Natural Historylocation not on record | 1 |
| UFMGlocation not on record | 1 |
| Quito, EC | 1 |
| CJBGlocation not on record | 1 |
| S, I, DSlocation not on record | 1 |
| G, M, FCMElocation not on record | 1 |
| Seropédica, BR | 1 |
| J, P, E, L, MEXUlocation not on record | 1 |
| A, G, T, MEXUlocation not on record | 1 |
| H, R, MEXUlocation not on record | 1 |
| UFSClocation not on record | 1 |
| Y, CAS, UClocation not on record | 1 |
| J, E, XALlocation not on record | 1 |
| UTFPR-CPlocation not on record | 1 |
| MEXU, G, Clocation not on record | 1 |
| J, M, MEXUlocation not on record | 1 |
| E, FCMElocation not on record | 1 |
| Tuscaloosa, US | 1 |
| Cambridge, US | 1 |
| Université National du Béninlocation not on record | 1 |
| Museo de Historia Natural de El Salvadorlocation not on record | 1 |
| Institut de Recherche Agronomique de Guinée (IRAG)location not on record | 1 |
| University of Hamburglocation not on record | 1 |
| Coimbra, PT | 1 |
| Minia, EG | 1 |
| Campo Mourão, BR | 1 |
| R, NY, XALlocation not on record | 1 |
| C, CASlocation not on record | 1 |
| L, XALlocation not on record | 1 |
| MEXU, XALlocation not on record | 1 |
| A, G, MEXUlocation not on record | 1 |
| J, MEXUlocation not on record | 1 |
| Senckenberg Gesellschaft für Naturforschung: Senckenberg Forschungsinstitut und Naturmuseumlocation not on record | 1 |
| N, R, MEXUlocation not on record | 1 |
| J, F, XALlocation not on record | 1 |
| F, A, XALlocation not on record | 1 |
| F, A, MEXU, XALlocation not on record | 1 |
| P, C, MEXUlocation not on record | 1 |
| P, MEXUlocation not on record | 1 |
| Zlocation not on record | 1 |
| "Alexandru Ioan Cuza" Universitylocation not on record | 1 |
| I, CAS, DSlocation not on record | 1 |
| R, XALlocation not on record | 1 |
| C, B, XALlocation not on record | 1 |
| A, G, XALlocation not on record | 1 |
| S, MEXU, FCMElocation not on record | 1 |
| A, O, J, L, MEXUlocation not on record | 1 |
| I, CAS, DS, UClocation not on record | 1 |
| H, Klocation not on record | 1 |
| C, M, V, A, MEXUlocation not on record | 1 |
| M, B, R, XALlocation not on record | 1 |
| G, CAS, USlocation not on record | 1 |
| O, MEXUlocation not on record | 1 |
| A, S, MEXUlocation not on record | 1 |
| J, R, MEXUlocation not on record | 1 |
| S, F, NY, USlocation not on record | 1 |
| S, M, XALlocation not on record | 1 |
| Ensenada, MX | 1 |
| N, W, I, DSlocation not on record | 1 |
| J, Klocation not on record | 1 |
| M, Flocation not on record | 1 |
| A, K, MEXUlocation not on record | 1 |
| S, B, DUKE, MEXUlocation not on record | 1 |
| T, J, K, NYlocation not on record | 1 |
| NY, S, M, E, B, MEXU, XALlocation not on record | 1 |
| F, US, G, NYlocation not on record | 1 |
| P, N, I, USlocation not on record | 1 |
| M, F, S, P, XALlocation not on record | 1 |
| J, DSlocation not on record | 1 |
| F, MO, NYlocation not on record | 1 |
| NE, I, DSlocation not on record | 1 |
| G, A, USFlocation not on record | 1 |
| M, G, CASlocation not on record | 1 |
| Juriquilla, MX | 1 |
| Instituto Nacional de Pesquisas da Amazônia (INPA)location not on record | 1 |
| Toronto, CA | 1 |
| FLASlocation not on record | 1 |
| W, UClocation not on record | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Avicennia germinans was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.