Agaricia agaricites, commonly known as lettuce coral or tan lettuce-leaf coral, is a species of colonial stony corals in the family Agariciidae. This coral is found in shallow waters in the tropical western Atlantic Ocean and the Caribbean Sea. It is a common species and the IUCN has assessed its status as being of "least concern".
No narrative description available for this taxon yet.
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Agaricia agaricites has left across the world's sequence archives.
At a glance
DNA specimens6
BINs1
Marker genes2
eDNA detections2
Marker genes sequenced
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
★COI-5P★ITS1
animal barcodefungal barcode
06Genome at a glanceGoaT · NCBI
The complete instruction manualAgaricia agaricites carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Genome size≈546 327 967 bp assembly estimate
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
BACTERIUM Carsonella ruddii0.00016 Gb
FUNGUS0.04 Gb
INSECT0.25 Gb
THIS GENOME Agaricia agaricites0.55 Gb
HUMAN3.2 Gb
WHEAT17 Gb
FERN Tmesipteris160.45 Gb
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
Assembly levelChromosome
Completeness97.3% BUSCO
07Deep time20.4–0 Ma
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
Fossil range20.4–0 Ma Miocene → Holocene
Dated fossil finds258
Most finds around1.75 Ma 105 finds · Pleistocene
DNA clock origin1.51 Ma TimeTree
StatusStill living record runs to the present
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Agaricia agaricites. Above itBeside it, the bars count how many dated finds fall in each slice of time; the tallest bar is labelled, and heights use a square-root scale so that thin slices stay visible next to rich ones. Read this as how well each stretch of time is preserved and studied — thick bars mean plenty of the right kind of rock and plenty of collectors, which is related to, but not the same as, how common it actually was. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
fossil range (PBDB)dated finds per sliceDNA clock origin
The two clocks disagree here. The fossil record reaches back to 20.4 Ma, but the molecular clock dates the lineage to only 1.51 Ma — about 18.9 Myr younger. A fossil cannot be older than the lineage it belongs to, so one of the two is off: either the fossil is assigned to the wrong species, or the clock is running fast.
How it livedPBDB
Environmentmarine
Life habitintermediate-level epifaunal, colonial, clonal
median 10.5 m · max 110 m · 20 739 records with depth
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy99% within 1 km
≤100 m 9 903≤1 km 106≤10 km 67>10 km 34
10 110 georeferenced · 32 926 without coordinates
Open the mapobservation + sensor43 036
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy53% within 1 km
≤100 m 32≤1 km 53≤10 km 29>10 km 46
160 georeferenced · 1 301 without coordinates
Open the institutions mapphysical evidence1 461
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Coordinate accuracy
no georeferenced coordinates · 16 records without
Open the mapnot free-living16
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions7 of 19 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Washington, US
564
Cambridge, US
41
Instituto de Investigaciones Marinas y Costeras (INVEMAR)location not on record
29
Alabama Museum of Natural Historylocation not on record
25
UM-RSMASlocation not on record
24
16
New Haven, US
12
Texas Cooperative Wildlife Collectionlocation not on record
10
CASlocation not on record
8
Moscow State Universitylocation not on record
7
Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record
3
Denver, US
2
Universidad de los Andes (UniAndes)location not on record
2
Paleontological Research Institutionlocation not on record
2
Instituto de Investigaciones Marinas y Costeras José Benito Vives de Andreis - Invemarlocation not on record
1
Stockholm, SE
1
Santa Barbara Museum of Natural Historylocation not on record
1
Universidad del Valle (UniValle)location not on record
1
Saint John, CA
1
19 institutions · 750 of 1 461 vouchered records shown · 50 without an institution code
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
09Environmental DNA2 detections
Where the DNA of Agaricia agaricites was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Detections DNA found2
Studies independent surveys1
Signal confidence: weakweighed across independent studies, places & mapped detections
Where its DNA was found
0 of 2 detections have coordinates
Open the map0 countries0
How strong is each trace?
DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.