Acropora humilis, also known as finger coral, is a species of acroporid coral found in the Gulf of Aden, the Red Sea, the northern and southwestern Indian Ocean, Australia, the central Indo-Pacific, Japan, southeast Asia, the East China Sea, the central and western Pacific Ocean, the Johnston Atoll and the northwestern Hawaiian Islands. It also occurs in the Raja Ampat Islands, Mariana Islands, Palau, and the Pitcairn Islands. Occurring in tropical shallow reefs on upper reef flats and slopes at depths of up to 12 m, it was described by Dana in 1846.
No narrative description available for this taxon yet.
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Acropora humilis has left across the world's sequence archives.
At a glance
DNA specimens20
BINs1
Marker genes14
eDNA detections4
Countries3
The DNA barcodethe species' typical barcode, built from every sequenced specimen
COI-5P658 bp consensus6 specimens
ACGT
▸ drag or hover over the strip to read any position — letter and how much it varies
Violet ticks below the strip = positions where individuals differ; flat = the species' unchanging signature. 100% of positions are identical in every specimen.
Diversity (π)0.10%
Haplotypes2
BIN1
Most divergent pair0.30%
Where individuals differ — all 2 variable positions, in barcode order
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
Besides the big genome in the nucleus, cells carry a small, circular loop of DNA inside the cell's energy factories — the mitochondria. It is inherited almost only from the mother and is a leftover from ancient bacteria that moved into the cell. The mitochondrial markers above (ND*, COX, CYTB…) are read from exactly this loop. Outer ring = one strand, inner ring = the other.
▸ Tap any coloured segment — or a gene chip — to see what it is
◖ violet arc = the COI-5P barcode — the ~650 bp read used to ID this species
Pick a coloured segment on the ring — or a gene chip — to read what that gene does.
protein-codingrRNAtRNA
07Deep time23–0 Ma
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
Fossil range23–0 Ma Oligocene → Holocene
Dated fossil finds71
Most finds around0.25 Ma 63 finds · Pleistocene
DNA clock origin2.58 Ma TimeTree
StatusStill living record runs to the present
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The solid bar is the fossil range: the span between the oldest and the youngest fossil that palaeontologists have assigned to Acropora humilis. Above itBeside it, the bars count how many dated finds fall in each slice of time; the tallest bar is labelled, and heights use a square-root scale so that thin slices stay visible next to rich ones. Read this as how well each stretch of time is preserved and studied — thick bars mean plenty of the right kind of rock and plenty of collectors, which is related to, but not the same as, how common it actually was. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
fossil range (PBDB)dated finds per sliceDNA clock origin
The two clocks disagree here. The fossil record reaches back to 23 Ma, but the molecular clock dates the lineage to only 2.58 Ma — about 20.5 Myr younger. A fossil cannot be older than the lineage it belongs to, so one of the two is off: either the fossil is assigned to the wrong species, or the clock is running fast.
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Coordinate accuracy83% within 1 km
≤100 m 1 370≤1 km 431≤10 km 102>10 km 273
2 176 georeferenced · 1 711 without coordinates
Open the mapobservation + sensor3 887
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Coordinate accuracy97% within 1 km
≤100 m 132≤1 km 691≤10 km 20>10 km 4
847 georeferenced · 643 without coordinates
Open the institutions mapphysical evidence1 490
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
10Collections & institutions
Holding institutions9 of 20 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
Institution
Specimens
Natick, US
632
Sydney, AU
24
Western Australian Museumlocation not on record
15
Washington, US
10
Florida Museum of Natural History- Zoology, Paleontology & Paleobotanylocation not on record
7
Toronto, CA
4
National Institute for Environmental Studieslocation not on record
3
CASlocation not on record
3
RMNHlocation not on record
3
South Kensington, GB
3
University of Floridalocation not on record
2
Santa Barbara Museum of Natural Historylocation not on record
2
Honolulu, US
2
Mutare Museumlocation not on record
1
Cambridge, US
1
Museum and Art Gallery of the Northern Territorylocation not on record
1
Australian Institute of Marine Sciencelocation not on record
1
WoRMS Editorial Boardlocation not on record
1
Frankfurt am Main
1
Chicago, US
1
20 institutions · 717 of 1 490 vouchered records shown · 9 without an institution code
09Environmental DNA4 detections
Where the DNA of Acropora humilis was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Detections DNA found4
Studies independent surveys1
Signal confidence: weakweighed across independent studies, places & mapped detections
Where its DNA was found
0 of 4 detections have coordinates
Open the map0 countries0
How strong is each trace?
DNA read depthRead counts were not reported for this species — the map shows presence only, not how strong each trace was.
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.