Acorus calamus
speciesAt a glance
Sources16 archives
Databases and archives Acorus calamus's data was compiled from.
WikipediaWikimedia Foundation20 languages↗
BioWikiNetmultilingual Wikipediamultilingual↗
GBIFGlobal Biodiversity Information Facility54 784 records↗
ENAEuropean Nucleotide Archive · EMBL-EBI164 eDNA detections↗
BOLD SystemsCentre for Biodiversity Genomics91 specimens↗
dukesphytochemcompounds
LOTUSNatural Products (Wikidata)compounds↗
NPASSNat. Product Activity & Species Sourcecompounds↗
GRIN TaxonomyUSDA-ARSdistribution & uses↗
Open Tree of LifeOpenTreephylogeny backbone↗
CCDBChromosome Counts DB · Tel Aviv U.genome & karyotype↗
GoaTGenomes on a Tree · Sangergenome & karyotype↗
NCBIUS National Library of Medicinegenome & karyotype↗
Paleobiology DatabasePBDB consortiumfossil record↗
WikidataWikimedia Foundationstructured facts↗
GLoBIGlobal Biotic Interactionsbiotic interactions↗Every layer below draws on the sources above — open one to explore it, or use ← → to move between tabs.
Acorus calamus (also called sweet flag, sway or muskrat root, among many common names) is a species of flowering plant with psychoactive chemicals. It is a tall wetland monocot of the family Acoraceae, in the genus Acorus. Although used in traditional medicine over centuries to treat digestive disorders and pain, there is no clinical evidence for its safety or efficacy – and ingested calamus may be toxic – leading to its commercial ban in the United States.
No narrative description available for this taxon yet.
Size & morphology9
Life cycle & reproduction35
Diet & foraging2
Habitat & environment30
Physiology & chemistry26
Uses & economy15
Other traits7
Compounds documented for Acorus calamus across natural-product and food-composition databases — not just the ~150 nutrients on a classic label ("nutritional dark matter").
Compound class profile5 classes
Documented compounds550 total
| Compound | Class | Amount | Source |
|---|---|---|---|
| STARCH | 400,000 ppm | DukesPhytochem | |
| EO | 100,000 ppm | DukesPhytochem | |
| BETA-ASARONE | 80,000 ppm | DukesPhytochem | |
| ASARONE | 48,000 ppm | DukesPhytochem | |
| RESIN | 25,000 ppm | DukesPhytochem | |
| POTASSIUM | 16,000 ppm | DukesPhytochem | |
| TANNIN | 15,000 ppm | DukesPhytochem | |
| ISOEUGENOL | 12,510 ppm | DukesPhytochem | |
| MUCILAGE | 8,000 ppm | DukesPhytochem | |
| CALCIUM | 7,040 ppm | DukesPhytochem |
A DNA barcode is a short, standardised stretch of genes that works like a fingerprint — enough to tell one species from another. Below is the molecular trace Acorus calamus has left across the world's sequence archives.
At a glance
★ the standard DNA barcode for this group — the short region actually read to tell this species apart. The rest are extra genes sequenced along the way.
The complete instruction manual Acorus calamus carries — its genome. We read it from three angles — how big it is, how the DNA is packed into chromosomes, and how completely it has been sequenced — and explain how to read each value as you go.
Genome sizehow big the whole instruction manual is
Measured in base pairs (bp) — the individual letters of DNA (human ≈ 3.2 Gb, a bacterium a few million). The chart places this genome on a logarithmic scale — each step to the right is ten times bigger — among reference organisms. Across species a bigger genome loosely tracks with larger cells, slower growth and lower-energy lifestyles (powered flight favours small genomes) — yet it does not imply more genes or a more advanced organism (the long-standing C-value paradox).
Chromosomes & ploidyhow the DNA is packaged
2n is the full chromosome count in a normal body cell; n is a gamete (egg or sperm), which carries half. Ploidy is how many complete chromosome sets each cell holds — 2× (diploid) is typical for animals, while higher levels (polyploidy) are common in plants. Click any value below to see the underlying records and sources.
2n 3621×GoaT · Kew Plant DNA C-values Database · CCDB · slov-fl · CCDB · iapt +6
2n 2418×CCDB · iapt · CCDB · book-ipcn65 · CCDB · ipcn-api-dl +4
2n 185×CCDB · book-indian_vol2 · CCDB · book-fedorov · CCDB · book-atlas-flowering-plants
2n 445×CCDB · book-indian_vol2 · CCDB · book-fedorov
2n 452×CCDB · ipcn-api-dl · CCDB · book-indian_vol2
2n 351×CCDB · ipcn-api-dl
2n 421×CCDB · ipcn-api-dl
2n 481×CCDB · book-ipcn65
n 01×CCDB · CromoCat 2015
tetraploid1×GoaT · Kew Plant DNA C-values Database
Sequencing statusassembly quality — how far to trust these numbers
Assembly level tells you how finished the sequence is — from fragmented contigs, through scaffolds, up to a full chromosome-level assembly. BUSCO % estimates completeness: the share of genes expected to be present that were actually found. These describe the data quality, not the organism.
How far back this lineage goes — and how we know. Everything here is measured in Ma, short for “mega-annum”: millions of years ago. The chart reads left to right like a calendar of the Earth, from the deep past on the left to today at the right edgetop to bottom like a core drilled through the Earth, from the deep past at the top down to today at the bottom.
At a glance
When this lineage existed
How to read this: the coloured strip along the bottomdown the left is the geological calendar — the standard epochs (Pliocene, Pleistocene…) every museum uses, shown so you can see which chapter of Earth's history this lineage lived in. This lineage is a young one, so the strip is zoomed in to epochs — the finer subdivisions inside a period. The orange marker is the DNA clock: DNA accumulates mutations at a roughly steady rate, so comparing this species' DNA with its relatives estimates when the lineage split off — independently of any fossil.
How it livedPBDB
Record type54 784 records
Origin
Range
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Museum / Voucheredphysical evidence
Backed by a physical specimen — a herbarium sheet, sample or voucher held in a collection. “Vouchered” means supported by material evidence, not just an observation.
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Wildobservation + sensor
Human sightings and records, or camera-trap / sensor detections — someone (or a device) saw or captured the species in the wild.
Holding institutions161 of 291 geolocated
Institutions and collections holding physical, vouchered specimens of this species — click a row to fly to it on the map.
| Institution | Specimens |
|---|---|
| Uniwersytet Wrocławskilocation not on record | 1 454 |
| Helsinki, FI | 224 |
| LDlocation not on record | 216 |
| Chongqing Museumlocation not on record | 161 |
| Moscow State Universitylocation not on record | 157 |
| Olocation not on record | 146 |
| Uppsala, SE | 128 |
| MeiseBGlocation not on record | 117 |
| Beijing, CN | 112 |
| BFLlocation not on record | 101 |
| Philadelphia, US | 89 |
| SLU Artdatabankenlocation not on record | 81 |
| South Kensington, GB | 70 |
| Irkutsk State Universitylocation not on record | 67 |
| Turku, FI | 56 |
| Tartu, EE | 52 |
| Salzburg, AT | 51 |
| Oskarshamn, SE | 46 |
| Bern, CH | 46 |
| Adam Mickiewicz University in Poznańlocation not on record | 45 |
| Tsukuba, JP | 45 |
| Yangling, CN | 45 |
| Chicago, US | 43 |
| Museo civico La Terra e l'Uomo di Crocetta del Montellolocation not on record | 42 |
| Wuzhou, CN | 37 |
| Sanda, JP | 35 |
| Bloomington, US | 32 |
| Bangkok, TH | 29 |
| Institute of Applied Ecology, Academia Sinicalocation not on record | 29 |
| TUR-Alocation not on record | 29 |
| Görlitz, DE | 29 |
| Guangzhou, CN | 28 |
| Museum Ludovicae Ulricae, Zoology Institute of the University of Uppsalalocation not on record | 27 |
| Bergen, NO | 27 |
| Université Lavallocation not on record | 26 |
| IFR-DNFlocation not on record | 26 |
| Kuopio, FI | 26 |
| Nanjing, CN | 25 |
| Kunming, CN | 25 |
| Oulu, FI | 25 |
| University of New Hampshirelocation not on record | 24 |
| Québec, CA | 24 |
| GBS RAN - Glavny Botanichesky Sad Rossijskoj Akademii Nauklocation not on record | 23 |
| University of Stellenboschlocation not on record | 23 |
| Tallinn, EE | 22 |
| Bando, JP | 22 |
| New Haven, US | 22 |
| Shinshu Universitylocation not on record | 22 |
| Green Bay, US | 22 |
| Saint Louis, US | 22 |
| Chiba, JP | 19 |
| Provincia di Livornolocation not on record | 18 |
| inatura Erlebnis Naturschau GmbHlocation not on record | 18 |
| Longwood Universitylocation not on record | 17 |
| Lanzhou, CN | 17 |
| Wuhan, CN | 16 |
| Trondheim, NO | 16 |
| Zürich, CH | 16 |
| Fukushima Universitylocation not on record | 15 |
| Uniwersytet Warszawskilocation not on record | 15 |
| Mlocation not on record | 14 |
| International Salmonella Centre (W.H.O.)location not on record | 13 |
| Dresden, DE | 13 |
| Vancouver, CA | 13 |
| Tomioka, JP | 12 |
| FJIDClocation not on record | 12 |
| Guilin, CN | 11 |
| Xian, CN | 11 |
| Porrentruy, CH | 11 |
| Chadron, US | 11 |
| Saint John, CA | 10 |
| University of Wisconsinlocation not on record | 10 |
| College Park, US | 10 |
| Montréal, CA | 10 |
| BRNUlocation not on record | 10 |
| Williamsburg, US | 10 |
| KMNlocation not on record | 10 |
| Madison, US | 10 |
| Toronto, CA | 10 |
| LfUlocation not on record | 9 |
| National Institute of Biological Resourceslocation not on record | 9 |
| Millersville, US | 9 |
| Ernst-Moritz-Arndt-Universitat Greifswaldlocation not on record | 9 |
| KR | 9 |
| Dover, US | 9 |
| Pullman, US | 9 |
| Tula State Lev Tolstoy Pedagogical Universitylocation not on record | 8 |
| Nagano City, JP | 8 |
| Knoxville, US | 8 |
| Zhengzhou, CN | 8 |
| GJOlocation not on record | 8 |
| Durban, ZA | 8 |
| Kew, GB | 8 |
| Staten Island, US | 7 |
| Denver, US | 7 |
| Morgantown, US | 7 |
| Tampa, US | 7 |
| NMBU:MINAlocation not on record | 7 |
| Strecker Museum, Baylor Universitylocation not on record | 7 |
| University of Alberta Museumslocation not on record | 7 |
| Northeast Institute of Geography and Agroecology, Chinese Academy of Scienceslocation not on record | 6 |
| Seoul, KR | 6 |
| Dekalb, US | 6 |
| Central China Normal Universitylocation not on record | 6 |
| Chengdu, CN | 6 |
| Logan, US | 6 |
| Wlocation not on record | 6 |
| Bronx, US | 6 |
| Forest Survey and Design Institute, Forestry Administrative Bureau of Daxinganlinglocation not on record | 6 |
| TROMlocation not on record | 6 |
| CZE061location not on record | 6 |
| CASlocation not on record | 6 |
| ENTClocation not on record | 6 |
| Davenport, US | 5 |
| Staatliches Museum fuer Naturkunde Karlsruhe (State Museum of Natural History)location not on record | 5 |
| Tokushima, JP | 5 |
| Natural History Museum Rotterdamlocation not on record | 5 |
| Zhejiang Museum of Natural Historylocation not on record | 5 |
| Philadelphia, US | 5 |
| Jyväskylä, FI | 5 |
| Mexico City, MX | 5 |
| Kyoto Universitylocation not on record | 5 |
| Berlin, DE | 5 |
| San Jose State University, Museum of Birds and Mammalslocation not on record | 5 |
| Fayetteville, US | 5 |
| Columbia, US | 5 |
| UGentlocation not on record | 5 |
| Chengdu, CN | 5 |
| Musee des Dinosaures d'Esperaza (Aude)location not on record | 5 |
| Moscow, US | 5 |
| Corvallis, US | 5 |
| 黔东南州民族医药研究所标本室location not on record | 5 |
| Zürich, CH | 5 |
| Herbarium of the Department of Botany, University of Tokyolocation not on record | 4 |
| FJFClocation not on record | 4 |
| Keene State Universitylocation not on record | 4 |
| University of Guelph, OAC Herbariumlocation not on record | 4 |
| 云南省思茅市民族传统医药研究所location not on record | 4 |
| Changsha, CN | 4 |
| Northeastern Forestry Universitylocation not on record | 4 |
| Frankfurt am Main | 4 |
| Xiamen, CN | 4 |
| Taipei, TW | 4 |
| GMBAlocation not on record | 4 |
| Yunnan Universitylocation not on record | 4 |
| Allentown, US | 4 |
| Xining, CN | 4 |
| Flagstaff, US | 4 |
| WTUlocation not on record | 4 |
| Philadelphia, US | 4 |
| PrivatHerblocation not on record | 4 |
| Tilburg, NL | 3 |
| FLADlocation not on record | 3 |
| Institut und Museum fuer Geologie und Palaeontologielocation not on record | 3 |
| Mount Pleasant, US | 3 |
| Ischia Marine Centrelocation not on record | 3 |
| Ann Arbor, US | 3 |
| KURAlocation not on record | 3 |
| Xinxiang, CN | 3 |
| Boise, US | 3 |
| Paris, FR | 3 |
| SIHUlocation not on record | 3 |
| Auckland, NZ | 3 |
| Metsähallituslocation not on record | 3 |
| Hangzhou, CN | 3 |
| Servico de Microbiologia e Imunologialocation not on record | 3 |
| Cambridge, US | 3 |
| Whitewater, US | 3 |
| Lincoln, US | 3 |
| Porvoo, FI | 3 |
| Tianjin Natural History Museumlocation not on record | 3 |
| Frauenfeld, CH | 3 |
| Nagatoro-machi, Chichibu-gun, JP | 3 |
| Taipei, TW | 3 |
| Russellville, US | 3 |
| St. Paul, US | 3 |
| Bourges, FR | 2 |
| Osaka, JP | 2 |
| Cambridge, US | 2 |
| Conway, US | 2 |
| Nishihara, JP | 2 |
| Naturalis Biodiversity Centerlocation not on record | 2 |
| Finnish Museum of Natural History, Botanical Museumlocation not on record | 2 |
| Sendai, JP | 2 |
| Uniwersytet Śląski w Katowicachlocation not on record | 2 |
| Karlsruhe, DE | 2 |
| Fairfax, US | 2 |
| Beijing, CN | 2 |
| Norfolk, US | 2 |
| BIO-UNIPIlocation not on record | 2 |
| Ishikawa Museum of Natural Historylocation not on record | 2 |
| Namur, BE | 2 |
| Xinjiang Institute of Ecology and Geography, Chinese Academy of Scienceslocation not on record | 2 |
| No collectionlocation not on record | 2 |
| Toyama, JP | 2 |
| Tuscaloosa, US | 2 |
| Jackson, US | 2 |
| University of Winnipeglocation not on record | 2 |
| Pretoria, ZA | 2 |
| University of Wisconsinlocation not on record | 2 |
| Miami, US | 2 |
| Durham, US | 2 |
| Hokkaido University Museumlocation not on record | 2 |
| Nagasaki University - Fisherieslocation not on record | 2 |
| James F. Matthews Center for Biodiversity Studieslocation not on record | 2 |
| CJBGlocation not on record | 2 |
| Chengdu, CN | 2 |
| Uniwersytet Rolniczy im. Hugona Kołłątaja w Krakowielocation not on record | 2 |
| Institute for Agricultural Bacteriology and Fermentation Biologylocation not on record | 2 |
| Edinburgh, GB | 2 |
| University of Southern Mississippilocation not on record | 2 |
| Mississippi State, US | 2 |
| Elikins, US | 2 |
| GAlocation not on record | 2 |
| JP | 2 |
| Lord Fairfax Community Collegelocation not on record | 2 |
| DBF-NHMDlocation not on record | 2 |
| GZUlocation not on record | 1 |
| Hudson, US | 1 |
| Edmonton, CA | 1 |
| PRClocation not on record | 1 |
| New Brunswick, US | 1 |
| Iwate Prefectural Museumlocation not on record | 1 |
| Fulda, DE | 1 |
| Palacký University in Olomouclocation not on record | 1 |
| Jinghong, CN | 1 |
| Riverside, US | 1 |
| Ivano-Frankove, UA | 1 |
| ASUlocation not on record | 1 |
| ifplocation not on record | 1 |
| Cape Town, ZA | 1 |
| San Angelo, US | 1 |
| The State Museum-Preserve "The Kulikovo pole"location not on record | 1 |
| Stockholm, SE | 1 |
| The Tula Region State Institution of Culture "Tula Museum Association"location not on record | 1 |
| Austin, US | 1 |
| Göteborg, SE | 1 |
| Cincinnati, US | 1 |
| Emporia, US | 1 |
| Cheney, US | 1 |
| SZUlocation not on record | 1 |
| Davis, US | 1 |
| Chapel Hill, US | 1 |
| Canadian Department of Agriculturelocation not on record | 1 |
| US | 1 |
| DOI/NPS, Little Rock Central High School National Historic Sitelocation not on record | 1 |
| Natural History Museum, Tribhuvan Universitylocation not on record | 1 |
| MAlocation not on record | 1 |
| Centre for Medicinal Plants Research-Arya Vaidya Salalocation not on record | 1 |
| H-Schuhwlocation not on record | 1 |
| EL PASO, US | 1 |
| Ypsilanti, US | 1 |
| Omachi Alpine Museumlocation not on record | 1 |
| Brussel, BE | 1 |
| Instytut Ochrony Przyrody Polskiej Akademii Nauklocation not on record | 1 |
| BSBIlocation not on record | 1 |
| NTNU University Museum, Department of Natural Historylocation not on record | 1 |
| Tromso University Museumlocation not on record | 1 |
| H-Adlerlocation not on record | 1 |
| Tampere, FI | 1 |
| NMWlocation not on record | 1 |
| Royal Botanic Gardens, Kewlocation not on record | 1 |
| AUAlocation not on record | 1 |
| GB | 1 |
| Nijmegen, NL | 1 |
| Barcelona, ES | 1 |
| Sede di Via Giorgio La Pira del Museo di Storia naturale di Firenze | Via Giorgio La Pira headquarter of the Natural History Museum in Florencelocation not on record | 1 |
| DOI/NPS, Mississippi National River & Recreation Arealocation not on record | 1 |
| Central Botanical Gardenlocation not on record | 1 |
| Turlock, US | 1 |
| Otaru, JP | 1 |
| Plocation not on record | 1 |
| Royal Botanic Garden Edinburghlocation not on record | 1 |
| Cambridge, US | 1 |
| Central China Agricultural Universitylocation not on record | 1 |
| Fredericton Stock Culture Collectionlocation not on record | 1 |
| DOI/NPS, Greenbelt Parklocation not on record | 1 |
| WINlocation not on record | 1 |
| Department of Plant Resources, National Herbarium and Plant Laboratorieslocation not on record | 1 |
| Jefferson City, US | 1 |
| Kirksville, US | 1 |
| Guangzhou, CN | 1 |
| San Luis Obispo, US | 1 |
| Pondicherry, IN | 1 |
| Hazara Universitylocation not on record | 1 |
| US | 1 |
| Awka, NG | 1 |
| Lanzhou Institute of Desert Research, Academia Sinicalocation not on record | 1 |
| BClocation not on record | 1 |
| Fujian Institute of Subtropical Botanylocation not on record | 1 |
| Forssa, FI | 1 |
Cultivated / Captivenot free-living
A living individual in a botanical garden, zoo or nursery — cultivated or kept, not free-living.
Where the DNA of Acorus calamus was picked up in samples of water, soil or air — nobody saw the organism, only its DNA left behind. A trace is a clue that the species was near, not a confirmed sighting.
Signal
Where its DNA was found
How strong is each trace?
Modelled climatemodelled
How to read this: each dot is one detection of this species' DNA in an environmental sample. The confidence meter weighs how many independent studies and places back up the signal — one detection in one study is a hint; many across several studies is solid. Records dated before 2008 (when eDNA methods began) are treated as likely mislabeled and left off the map.